Hb_000535_030

Information

Type -
Description -
Location Contig535: 31065-33013
Sequence    

Annotation

kegg
ID rcu:RCOM_0863810
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_012082183.1
description PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
swissprot
ID A6YIH8
description Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1
trembl
ID A0A067JZK3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19400 PE=3 SV=1
Gene Ontology
ID GO:0005506
description premnaspirodiene oxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47523: 32040-32430
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000535_030 0.0 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
2 Hb_003385_090 0.058760972 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
3 Hb_007666_040 0.0906128256 - - PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Jatropha curcas]
4 Hb_003117_060 0.0945248033 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
5 Hb_032651_060 0.0955682894 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_001114_210 0.0963819976 - - PREDICTED: periaxin [Jatropha curcas]
7 Hb_001080_040 0.0997064815 - - cytochrome P450, putative [Ricinus communis]
8 Hb_001363_010 0.099909918 - - hypothetical protein CISIN_1g027763mg [Citrus sinensis]
9 Hb_012268_010 0.1010437342 - - glutamic acid-rich protein [Manihot esculenta]
10 Hb_135811_020 0.1022768274 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
11 Hb_049562_010 0.1154950416 - - hypothetical protein JCGZ_25442 [Jatropha curcas]
12 Hb_000116_390 0.1180473373 - - Mlo protein [Hevea brasiliensis]
13 Hb_000031_130 0.119961479 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
14 Hb_009297_010 0.1232732924 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
15 Hb_106969_010 0.1245181267 - - Cytochrome P450 76C4 [Glycine soja]
16 Hb_003636_010 0.1259877144 - - hypothetical protein CISIN_1g037850mg, partial [Citrus sinensis]
17 Hb_005396_100 0.1263250979 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001376_040 0.126378719 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
19 Hb_047690_010 0.1268810419 - - Phosphoprotein phosphatase [Theobroma cacao]
20 Hb_000977_160 0.1273048622 - - Serine-threonine protein kinase, plant-type, putative [Theobroma cacao]

Gene co-expression network

sample Hb_000535_030 Hb_000535_030 Hb_003385_090 Hb_003385_090 Hb_000535_030--Hb_003385_090 Hb_007666_040 Hb_007666_040 Hb_000535_030--Hb_007666_040 Hb_003117_060 Hb_003117_060 Hb_000535_030--Hb_003117_060 Hb_032651_060 Hb_032651_060 Hb_000535_030--Hb_032651_060 Hb_001114_210 Hb_001114_210 Hb_000535_030--Hb_001114_210 Hb_001080_040 Hb_001080_040 Hb_000535_030--Hb_001080_040 Hb_003385_090--Hb_032651_060 Hb_003385_090--Hb_007666_040 Hb_003385_090--Hb_001080_040 Hb_049562_010 Hb_049562_010 Hb_003385_090--Hb_049562_010 Hb_003385_090--Hb_001114_210 Hb_007666_040--Hb_003117_060 Hb_012053_030 Hb_012053_030 Hb_007666_040--Hb_012053_030 Hb_007666_040--Hb_001114_210 Hb_001489_030 Hb_001489_030 Hb_007666_040--Hb_001489_030 Hb_003636_010 Hb_003636_010 Hb_003117_060--Hb_003636_010 Hb_118777_010 Hb_118777_010 Hb_003117_060--Hb_118777_010 Hb_003117_060--Hb_003385_090 Hb_106969_010 Hb_106969_010 Hb_003117_060--Hb_106969_010 Hb_032651_060--Hb_049562_010 Hb_032651_060--Hb_001080_040 Hb_001363_010 Hb_001363_010 Hb_032651_060--Hb_001363_010 Hb_005649_120 Hb_005649_120 Hb_032651_060--Hb_005649_120 Hb_001376_040 Hb_001376_040 Hb_001114_210--Hb_001376_040 Hb_000031_130 Hb_000031_130 Hb_001114_210--Hb_000031_130 Hb_001114_210--Hb_049562_010 Hb_001114_210--Hb_005649_120 Hb_001114_210--Hb_001080_040 Hb_008062_020 Hb_008062_020 Hb_001114_210--Hb_008062_020 Hb_001080_040--Hb_049562_010 Hb_039814_010 Hb_039814_010 Hb_001080_040--Hb_039814_010 Hb_154646_010 Hb_154646_010 Hb_001080_040--Hb_154646_010 Hb_001817_070 Hb_001817_070 Hb_001080_040--Hb_001817_070 Hb_000135_040 Hb_000135_040 Hb_001080_040--Hb_000135_040 Hb_008953_020 Hb_008953_020 Hb_001080_040--Hb_008953_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 69.9038 1.3413 1.94514 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0993067 0.0781347 0.0369522 35.9735 0.782276

CAGE analysis