Hb_000548_010

Information

Type -
Description -
Location Contig548: 12454-13326
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000548_010 0.0 - - -
2 Hb_008147_030 0.1346017174 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
3 Hb_003320_030 0.1817985371 - - conserved hypothetical protein [Ricinus communis]
4 Hb_156144_020 0.1857897017 - - PREDICTED: uncharacterized protein At5g65660 [Vitis vinifera]
5 Hb_001146_070 0.1886509746 transcription factor TF Family: bHLH LMYC2 [Hevea brasiliensis]
6 Hb_001268_230 0.1914759665 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
7 Hb_001017_100 0.1981865453 - - PREDICTED: uncharacterized protein LOC105644705 [Jatropha curcas]
8 Hb_141838_010 0.201795232 - - -
9 Hb_005271_030 0.2199847275 - - copper-transporting atpase p-type, putative [Ricinus communis]
10 Hb_022749_030 0.2227234785 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
11 Hb_004460_020 0.2230057237 - - chaperone protein DNAj, putative [Ricinus communis]
12 Hb_004092_010 0.2241793249 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
13 Hb_029464_010 0.2242957293 - - PREDICTED: zeatin O-glucosyltransferase-like [Jatropha curcas]
14 Hb_000018_160 0.226378289 - - nitrate transporter, putative [Ricinus communis]
15 Hb_002759_130 0.226754885 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007158_030 0.2272970437 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_003108_010 0.230842373 - - -
18 Hb_004648_040 0.2333716295 - - PREDICTED: uncharacterized protein LOC105643056 [Jatropha curcas]
19 Hb_002983_100 0.2349582905 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
20 Hb_001767_020 0.2350427807 - - PREDICTED: WAT1-related protein At1g68170-like, partial [Jatropha curcas]

Gene co-expression network

sample Hb_000548_010 Hb_000548_010 Hb_008147_030 Hb_008147_030 Hb_000548_010--Hb_008147_030 Hb_003320_030 Hb_003320_030 Hb_000548_010--Hb_003320_030 Hb_156144_020 Hb_156144_020 Hb_000548_010--Hb_156144_020 Hb_001146_070 Hb_001146_070 Hb_000548_010--Hb_001146_070 Hb_001268_230 Hb_001268_230 Hb_000548_010--Hb_001268_230 Hb_001017_100 Hb_001017_100 Hb_000548_010--Hb_001017_100 Hb_008147_030--Hb_001268_230 Hb_141838_010 Hb_141838_010 Hb_008147_030--Hb_141838_010 Hb_008147_030--Hb_003320_030 Hb_031862_170 Hb_031862_170 Hb_008147_030--Hb_031862_170 Hb_004460_020 Hb_004460_020 Hb_008147_030--Hb_004460_020 Hb_002983_100 Hb_002983_100 Hb_003320_030--Hb_002983_100 Hb_001329_260 Hb_001329_260 Hb_003320_030--Hb_001329_260 Hb_005116_020 Hb_005116_020 Hb_003320_030--Hb_005116_020 Hb_001159_210 Hb_001159_210 Hb_003320_030--Hb_001159_210 Hb_000038_150 Hb_000038_150 Hb_003320_030--Hb_000038_150 Hb_134732_010 Hb_134732_010 Hb_003320_030--Hb_134732_010 Hb_001892_160 Hb_001892_160 Hb_156144_020--Hb_001892_160 Hb_000175_530 Hb_000175_530 Hb_156144_020--Hb_000175_530 Hb_000580_060 Hb_000580_060 Hb_156144_020--Hb_000580_060 Hb_003494_260 Hb_003494_260 Hb_156144_020--Hb_003494_260 Hb_156144_020--Hb_001017_100 Hb_007634_020 Hb_007634_020 Hb_156144_020--Hb_007634_020 Hb_005271_030 Hb_005271_030 Hb_001146_070--Hb_005271_030 Hb_001146_070--Hb_000175_530 Hb_029464_010 Hb_029464_010 Hb_001146_070--Hb_029464_010 Hb_064201_010 Hb_064201_010 Hb_001146_070--Hb_064201_010 Hb_007158_030 Hb_007158_030 Hb_001146_070--Hb_007158_030 Hb_001146_070--Hb_001017_100 Hb_004648_040 Hb_004648_040 Hb_001268_230--Hb_004648_040 Hb_098315_110 Hb_098315_110 Hb_001268_230--Hb_098315_110 Hb_000317_080 Hb_000317_080 Hb_001268_230--Hb_000317_080 Hb_001628_110 Hb_001628_110 Hb_001268_230--Hb_001628_110 Hb_053543_010 Hb_053543_010 Hb_001268_230--Hb_053543_010 Hb_000300_530 Hb_000300_530 Hb_001268_230--Hb_000300_530 Hb_001017_100--Hb_005271_030 Hb_002506_110 Hb_002506_110 Hb_001017_100--Hb_002506_110 Hb_000161_100 Hb_000161_100 Hb_001017_100--Hb_000161_100 Hb_000018_160 Hb_000018_160 Hb_001017_100--Hb_000018_160 Hb_000441_230 Hb_000441_230 Hb_001017_100--Hb_000441_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.842 0.336597 0 0 37.2869 15.9628
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.43259 0 4.7633 1.28229 0

CAGE analysis