Hb_000552_060

Information

Type -
Description -
Location Contig552: 38192-53514
Sequence    

Annotation

kegg
ID rcu:RCOM_0308380
description Jasmonate O-methyltransferase, putative (EC:2.1.1.141)
nr
ID XP_012081488.1
description PREDICTED: theobromine synthase 2-like isoform X3 [Jatropha curcas]
swissprot
ID Q8H0D2
description 3,7-dimethylxanthine N-methyltransferase OS=Coffea arabica GN=DXMT1 PE=1 SV=1
trembl
ID A0A067K1C9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18506 PE=4 SV=1
Gene Ontology
ID GO:0008168
description probable caffeine synthase 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000552_060 0.0 - - PREDICTED: theobromine synthase 2-like isoform X3 [Jatropha curcas]
2 Hb_000028_620 0.1345566095 - - conserved hypothetical protein [Ricinus communis]
3 Hb_009615_030 0.1392480196 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_002580_020 0.1472207941 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
5 Hb_002400_480 0.1552109348 - - PREDICTED: uncharacterized protein LOC105637596 [Jatropha curcas]
6 Hb_000749_160 0.1552601472 - - calmodulin binding protein, putative [Ricinus communis]
7 Hb_002601_040 0.1587064343 - - hypothetical protein JCGZ_06197 [Jatropha curcas]
8 Hb_081191_010 0.1663231865 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
9 Hb_003177_100 0.1720802579 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
10 Hb_002818_170 0.1824022368 - - hypothetical protein POPTR_0014s10650g [Populus trichocarpa]
11 Hb_004984_020 0.1841093132 - - PREDICTED: uncharacterized protein LOC105647814 [Jatropha curcas]
12 Hb_004357_030 0.1843549795 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
13 Hb_005672_030 0.1853977763 - - PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
14 Hb_002097_180 0.1855422003 - - PREDICTED: probable pectate lyase 12 isoform X1 [Jatropha curcas]
15 Hb_000705_110 0.1882960819 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
16 Hb_002592_050 0.1885015018 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
17 Hb_000429_030 0.1896881958 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
18 Hb_001616_100 0.1901083082 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
19 Hb_000805_270 0.1920643749 - - PREDICTED: expansin-A4 [Gossypium raimondii]
20 Hb_001863_520 0.1930252926 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000552_060 Hb_000552_060 Hb_000028_620 Hb_000028_620 Hb_000552_060--Hb_000028_620 Hb_009615_030 Hb_009615_030 Hb_000552_060--Hb_009615_030 Hb_002580_020 Hb_002580_020 Hb_000552_060--Hb_002580_020 Hb_002400_480 Hb_002400_480 Hb_000552_060--Hb_002400_480 Hb_000749_160 Hb_000749_160 Hb_000552_060--Hb_000749_160 Hb_002601_040 Hb_002601_040 Hb_000552_060--Hb_002601_040 Hb_000028_620--Hb_009615_030 Hb_000028_620--Hb_002580_020 Hb_081191_010 Hb_081191_010 Hb_000028_620--Hb_081191_010 Hb_000028_620--Hb_000749_160 Hb_002097_180 Hb_002097_180 Hb_000028_620--Hb_002097_180 Hb_009615_030--Hb_002580_020 Hb_009615_030--Hb_081191_010 Hb_003177_100 Hb_003177_100 Hb_009615_030--Hb_003177_100 Hb_009615_030--Hb_000749_160 Hb_009615_030--Hb_002097_180 Hb_000429_030 Hb_000429_030 Hb_009615_030--Hb_000429_030 Hb_002580_020--Hb_081191_010 Hb_003811_050 Hb_003811_050 Hb_002580_020--Hb_003811_050 Hb_000676_130 Hb_000676_130 Hb_002580_020--Hb_000676_130 Hb_006834_010 Hb_006834_010 Hb_002580_020--Hb_006834_010 Hb_000853_010 Hb_000853_010 Hb_002580_020--Hb_000853_010 Hb_002400_480--Hb_002601_040 Hb_000243_340 Hb_000243_340 Hb_002400_480--Hb_000243_340 Hb_110631_010 Hb_110631_010 Hb_002400_480--Hb_110631_010 Hb_030088_010 Hb_030088_010 Hb_002400_480--Hb_030088_010 Hb_004397_010 Hb_004397_010 Hb_002400_480--Hb_004397_010 Hb_003964_060 Hb_003964_060 Hb_000749_160--Hb_003964_060 Hb_000676_170 Hb_000676_170 Hb_000749_160--Hb_000676_170 Hb_008727_040 Hb_008727_040 Hb_000749_160--Hb_008727_040 Hb_005144_080 Hb_005144_080 Hb_000749_160--Hb_005144_080 Hb_000749_160--Hb_002580_020 Hb_002601_040--Hb_000243_340 Hb_002304_100 Hb_002304_100 Hb_002601_040--Hb_002304_100 Hb_000339_050 Hb_000339_050 Hb_002601_040--Hb_000339_050 Hb_001645_030 Hb_001645_030 Hb_002601_040--Hb_001645_030 Hb_000805_270 Hb_000805_270 Hb_002601_040--Hb_000805_270 Hb_000086_510 Hb_000086_510 Hb_002601_040--Hb_000086_510
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0312094 0.0333995 0.191585 0.735776 0 0.0092356
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0172227 0 0.39731 0.0364269

CAGE analysis