Hb_000561_020

Information

Type -
Description -
Location Contig561: 21912-22283
Sequence    

Annotation

kegg
ID pxb:103954024
description uncharacterized LOC103954024
nr
ID KDP44329.1
description hypothetical protein JCGZ_19196 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJ90
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19196 PE=4 SV=1
Gene Ontology
ID GO:0006979
description hypothetical protein JCGZ_19196

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000561_020 0.0 - - hypothetical protein JCGZ_19196 [Jatropha curcas]
2 Hb_000196_050 0.1081840623 - - hypothetical protein JCGZ_20265 [Jatropha curcas]
3 Hb_003943_130 0.1128245501 - - PREDICTED: uncharacterized protein LOC105636341 [Jatropha curcas]
4 Hb_000500_060 0.1228168616 - - BnaC08g21190D [Brassica napus]
5 Hb_031042_010 0.1262278242 - - hypothetical protein JCGZ_03409 [Jatropha curcas]
6 Hb_009554_010 0.1289267387 - - PREDICTED: multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Jatropha curcas]
7 Hb_003683_040 0.1375017836 - - unnamed protein product [Coffea canephora]
8 Hb_000707_030 0.1382897325 - - PREDICTED: probable proteasome inhibitor [Vitis vinifera]
9 Hb_015175_030 0.1392367071 - - PREDICTED: RNA-binding protein 24-A [Jatropha curcas]
10 Hb_001754_070 0.1416899403 - - hypothetical protein POPTR_0026s00250g [Populus trichocarpa]
11 Hb_001158_150 0.1419841292 - - hypothetical protein JCGZ_26407 [Jatropha curcas]
12 Hb_004125_110 0.1435396606 - - PREDICTED: 60S ribosomal protein L14-1 [Jatropha curcas]
13 Hb_009793_010 0.1463918037 - - hypothetical protein JCGZ_17222 [Jatropha curcas]
14 Hb_001369_640 0.147528069 - - PREDICTED: 40S ribosomal protein S20-1 [Jatropha curcas]
15 Hb_181385_010 0.1493439941 - - PREDICTED: uncharacterized protein LOC105650319 [Jatropha curcas]
16 Hb_001322_150 0.1494145175 - - PREDICTED: vesicle-associated protein 2-1 [Jatropha curcas]
17 Hb_001565_080 0.1504772375 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Jatropha curcas]
18 Hb_130235_010 0.150748649 - - PREDICTED: ras-related protein RABF1 [Jatropha curcas]
19 Hb_001638_260 0.1524107897 - - PREDICTED: 60S acidic ribosomal protein P1 [Vitis vinifera]
20 Hb_007441_270 0.1529450433 - - PREDICTED: 40S ribosomal protein S11 [Jatropha curcas]

Gene co-expression network

sample Hb_000561_020 Hb_000561_020 Hb_000196_050 Hb_000196_050 Hb_000561_020--Hb_000196_050 Hb_003943_130 Hb_003943_130 Hb_000561_020--Hb_003943_130 Hb_000500_060 Hb_000500_060 Hb_000561_020--Hb_000500_060 Hb_031042_010 Hb_031042_010 Hb_000561_020--Hb_031042_010 Hb_009554_010 Hb_009554_010 Hb_000561_020--Hb_009554_010 Hb_003683_040 Hb_003683_040 Hb_000561_020--Hb_003683_040 Hb_000196_050--Hb_003683_040 Hb_002316_060 Hb_002316_060 Hb_000196_050--Hb_002316_060 Hb_000184_050 Hb_000184_050 Hb_000196_050--Hb_000184_050 Hb_000196_050--Hb_009554_010 Hb_000815_260 Hb_000815_260 Hb_000196_050--Hb_000815_260 Hb_000196_050--Hb_031042_010 Hb_001369_640 Hb_001369_640 Hb_003943_130--Hb_001369_640 Hb_002289_120 Hb_002289_120 Hb_003943_130--Hb_002289_120 Hb_000152_420 Hb_000152_420 Hb_003943_130--Hb_000152_420 Hb_003943_130--Hb_002316_060 Hb_001538_090 Hb_001538_090 Hb_003943_130--Hb_001538_090 Hb_006909_030 Hb_006909_030 Hb_003943_130--Hb_006909_030 Hb_000500_060--Hb_031042_010 Hb_007441_270 Hb_007441_270 Hb_000500_060--Hb_007441_270 Hb_000500_060--Hb_000196_050 Hb_002701_050 Hb_002701_050 Hb_000500_060--Hb_002701_050 Hb_000108_140 Hb_000108_140 Hb_000500_060--Hb_000108_140 Hb_000199_070 Hb_000199_070 Hb_000500_060--Hb_000199_070 Hb_004007_100 Hb_004007_100 Hb_031042_010--Hb_004007_100 Hb_031042_010--Hb_007441_270 Hb_031042_010--Hb_002701_050 Hb_001638_260 Hb_001638_260 Hb_009554_010--Hb_001638_260 Hb_009793_010 Hb_009793_010 Hb_009554_010--Hb_009793_010 Hb_003226_210 Hb_003226_210 Hb_009554_010--Hb_003226_210 Hb_002713_070 Hb_002713_070 Hb_009554_010--Hb_002713_070 Hb_006816_530 Hb_006816_530 Hb_009554_010--Hb_006816_530 Hb_000086_550 Hb_000086_550 Hb_009554_010--Hb_000086_550 Hb_003683_040--Hb_000184_050 Hb_154826_010 Hb_154826_010 Hb_003683_040--Hb_154826_010 Hb_003683_040--Hb_000815_260 Hb_003683_040--Hb_009554_010 Hb_130291_010 Hb_130291_010 Hb_003683_040--Hb_130291_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
67.8182 86.0454 17.3195 163.471 83.2028 147.108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
163.566 330.742 99.6642 59.351 11.1379

CAGE analysis