Hb_000563_180

Information

Type -
Description -
Location Contig563: 109952-111602
Sequence    

Annotation

kegg
ID rcu:RCOM_0682650
description hypothetical protein
nr
ID XP_012084247.1
description PREDICTED: J protein JJJ2 [Jatropha curcas]
swissprot
ID Q8TQR1
description Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1
trembl
ID A0A067JVE0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18932 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000563_180 0.0 - - PREDICTED: J protein JJJ2 [Jatropha curcas]
2 Hb_001754_100 0.1464345235 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
3 Hb_001005_170 0.1547018479 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
4 Hb_002874_010 0.1624009889 - - PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Jatropha curcas]
5 Hb_005306_030 0.1630005971 - - PREDICTED: protein IQ-DOMAIN 1 [Jatropha curcas]
6 Hb_001862_160 0.1630385312 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
7 Hb_001366_380 0.167393719 - - PREDICTED: pectin acetylesterase 6-like isoform X2 [Jatropha curcas]
8 Hb_025163_020 0.1704619017 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
9 Hb_008215_020 0.1727333055 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_001076_010 0.1759914846 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
11 Hb_000397_170 0.1772775913 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000057_190 0.1798831746 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001649_050 0.1817970079 - - Shaggy-like kinase 13 isoform 1 [Theobroma cacao]
14 Hb_000321_040 0.1830061789 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
15 Hb_003226_060 0.1877171827 - - Pectinesterase-2 precursor, putative [Ricinus communis]
16 Hb_006316_090 0.1916758807 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
17 Hb_004096_010 0.1918269171 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 40 [Jatropha curcas]
18 Hb_000103_460 0.1922056562 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
19 Hb_000358_010 0.1932403182 - - PREDICTED: basic blue protein [Populus euphratica]
20 Hb_000621_100 0.1935301518 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000563_180 Hb_000563_180 Hb_001754_100 Hb_001754_100 Hb_000563_180--Hb_001754_100 Hb_001005_170 Hb_001005_170 Hb_000563_180--Hb_001005_170 Hb_002874_010 Hb_002874_010 Hb_000563_180--Hb_002874_010 Hb_005306_030 Hb_005306_030 Hb_000563_180--Hb_005306_030 Hb_001862_160 Hb_001862_160 Hb_000563_180--Hb_001862_160 Hb_001366_380 Hb_001366_380 Hb_000563_180--Hb_001366_380 Hb_000397_170 Hb_000397_170 Hb_001754_100--Hb_000397_170 Hb_150745_010 Hb_150745_010 Hb_001754_100--Hb_150745_010 Hb_003226_060 Hb_003226_060 Hb_001754_100--Hb_003226_060 Hb_000574_180 Hb_000574_180 Hb_001754_100--Hb_000574_180 Hb_000413_220 Hb_000413_220 Hb_001754_100--Hb_000413_220 Hb_000256_170 Hb_000256_170 Hb_001754_100--Hb_000256_170 Hb_001288_020 Hb_001288_020 Hb_001005_170--Hb_001288_020 Hb_001005_170--Hb_001862_160 Hb_000656_120 Hb_000656_120 Hb_001005_170--Hb_000656_120 Hb_004096_010 Hb_004096_010 Hb_001005_170--Hb_004096_010 Hb_003413_020 Hb_003413_020 Hb_001005_170--Hb_003413_020 Hb_001076_010 Hb_001076_010 Hb_002874_010--Hb_001076_010 Hb_004631_040 Hb_004631_040 Hb_002874_010--Hb_004631_040 Hb_000358_010 Hb_000358_010 Hb_002874_010--Hb_000358_010 Hb_007044_260 Hb_007044_260 Hb_002874_010--Hb_007044_260 Hb_000085_360 Hb_000085_360 Hb_002874_010--Hb_000085_360 Hb_119044_040 Hb_119044_040 Hb_002874_010--Hb_119044_040 Hb_001649_050 Hb_001649_050 Hb_005306_030--Hb_001649_050 Hb_005306_030--Hb_001366_380 Hb_011849_030 Hb_011849_030 Hb_005306_030--Hb_011849_030 Hb_008143_050 Hb_008143_050 Hb_005306_030--Hb_008143_050 Hb_000103_460 Hb_000103_460 Hb_005306_030--Hb_000103_460 Hb_004607_020 Hb_004607_020 Hb_005306_030--Hb_004607_020 Hb_000979_070 Hb_000979_070 Hb_001862_160--Hb_000979_070 Hb_001862_160--Hb_004096_010 Hb_001269_120 Hb_001269_120 Hb_001862_160--Hb_001269_120 Hb_151094_020 Hb_151094_020 Hb_001862_160--Hb_151094_020 Hb_000438_030 Hb_000438_030 Hb_001862_160--Hb_000438_030 Hb_147060_010 Hb_147060_010 Hb_001862_160--Hb_147060_010 Hb_000272_010 Hb_000272_010 Hb_001366_380--Hb_000272_010 Hb_000260_670 Hb_000260_670 Hb_001366_380--Hb_000260_670 Hb_006316_090 Hb_006316_090 Hb_001366_380--Hb_006316_090 Hb_001366_380--Hb_001649_050 Hb_001366_380--Hb_001076_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.109953 1.40197 0.573227 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0514448 0 0.416126 0

CAGE analysis