Hb_000563_370

Information

Type -
Description -
Location Contig563: 236786-237139
Sequence    

Annotation

kegg
ID rcu:RCOM_0682120
description hypothetical protein
nr
ID KDP27839.1
description hypothetical protein JCGZ_18919 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K7P9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18919 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000563_370 0.0 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
2 Hb_007328_020 0.0007968476 - - -
3 Hb_000215_380 0.0021596868 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
4 Hb_044724_020 0.0132836389 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
5 Hb_106595_010 0.0251218491 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
6 Hb_064583_010 0.0271427758 - - PREDICTED: germin-like protein subfamily 1 member 7 [Vitis vinifera]
7 Hb_007264_050 0.0290073428 - - -
8 Hb_128894_010 0.0403618217 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_099085_010 0.0423586008 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
10 Hb_034558_010 0.0560201958 - - -
11 Hb_001766_090 0.0772686555 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
12 Hb_030312_060 0.0811921476 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
13 Hb_005050_010 0.0871846211 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
14 Hb_001796_010 0.0931636355 - - purine transporter, putative [Ricinus communis]
15 Hb_007658_030 0.0941476677 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
16 Hb_030593_010 0.097934089 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
17 Hb_000016_290 0.0995934469 - - multidrug resistance pump, putative [Ricinus communis]
18 Hb_000484_050 0.1012971799 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
19 Hb_000979_270 0.1020937544 - - PREDICTED: MLP-like protein 31 [Jatropha curcas]
20 Hb_018609_010 0.1058694555 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000563_370 Hb_000563_370 Hb_007328_020 Hb_007328_020 Hb_000563_370--Hb_007328_020 Hb_000215_380 Hb_000215_380 Hb_000563_370--Hb_000215_380 Hb_044724_020 Hb_044724_020 Hb_000563_370--Hb_044724_020 Hb_106595_010 Hb_106595_010 Hb_000563_370--Hb_106595_010 Hb_064583_010 Hb_064583_010 Hb_000563_370--Hb_064583_010 Hb_007264_050 Hb_007264_050 Hb_000563_370--Hb_007264_050 Hb_007328_020--Hb_000215_380 Hb_007328_020--Hb_044724_020 Hb_007328_020--Hb_106595_010 Hb_007328_020--Hb_064583_010 Hb_007328_020--Hb_007264_050 Hb_000215_380--Hb_044724_020 Hb_000215_380--Hb_106595_010 Hb_000215_380--Hb_007264_050 Hb_000215_380--Hb_064583_010 Hb_044724_020--Hb_106595_010 Hb_128894_010 Hb_128894_010 Hb_044724_020--Hb_128894_010 Hb_044724_020--Hb_007264_050 Hb_106595_010--Hb_128894_010 Hb_034558_010 Hb_034558_010 Hb_106595_010--Hb_034558_010 Hb_099085_010 Hb_099085_010 Hb_064583_010--Hb_099085_010 Hb_064583_010--Hb_044724_020 Hb_064583_010--Hb_007264_050 Hb_007264_050--Hb_106595_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.14263 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0885774 0

CAGE analysis