Hb_000563_410

Information

Type -
Description -
Location Contig563: 290349-290699
Sequence    

Annotation

kegg
ID rcu:RCOM_0682100
description hypothetical protein
nr
ID KDP27837.1
description hypothetical protein JCGZ_18917 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVC5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18917 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48919: 290147-290536
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000563_410 0.0 - - hypothetical protein JCGZ_18917 [Jatropha curcas]
2 Hb_000069_630 0.1348234259 - - hypothetical protein [Hevea brasiliensis]
3 Hb_000705_050 0.1351188976 - - PREDICTED: uncharacterized protein C167.05 [Vitis vinifera]
4 Hb_186495_010 0.1621840834 - - Phosphoprotein phosphatase [Theobroma cacao]
5 Hb_034688_030 0.1664078563 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
6 Hb_007161_020 0.1726892246 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
7 Hb_080068_010 0.1739387558 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
8 Hb_003212_020 0.1744688229 - - hypothetical protein PHAVU_009G114800g [Phaseolus vulgaris]
9 Hb_016120_020 0.177082747 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
10 Hb_000720_060 0.1780396691 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
11 Hb_001610_060 0.1790409671 - - hypothetical protein TRIUR3_12067 [Triticum urartu]
12 Hb_072153_010 0.1796388925 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
13 Hb_003304_090 0.184771071 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
14 Hb_000856_250 0.1848687687 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
15 Hb_135720_010 0.188753673 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
16 Hb_000115_290 0.1898593237 - - PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]
17 Hb_001115_010 0.1903011398 - - PREDICTED: 4-coumarate--CoA ligase 2-like [Jatropha curcas]
18 Hb_001775_060 0.1910363169 - - conserved hypothetical protein [Ricinus communis]
19 Hb_116194_010 0.1933812092 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
20 Hb_000011_320 0.1962320655 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]

Gene co-expression network

sample Hb_000563_410 Hb_000563_410 Hb_000069_630 Hb_000069_630 Hb_000563_410--Hb_000069_630 Hb_000705_050 Hb_000705_050 Hb_000563_410--Hb_000705_050 Hb_186495_010 Hb_186495_010 Hb_000563_410--Hb_186495_010 Hb_034688_030 Hb_034688_030 Hb_000563_410--Hb_034688_030 Hb_007161_020 Hb_007161_020 Hb_000563_410--Hb_007161_020 Hb_080068_010 Hb_080068_010 Hb_000563_410--Hb_080068_010 Hb_000720_060 Hb_000720_060 Hb_000069_630--Hb_000720_060 Hb_135720_010 Hb_135720_010 Hb_000069_630--Hb_135720_010 Hb_000069_630--Hb_186495_010 Hb_000069_630--Hb_034688_030 Hb_001775_060 Hb_001775_060 Hb_000069_630--Hb_001775_060 Hb_003212_020 Hb_003212_020 Hb_000705_050--Hb_003212_020 Hb_003304_090 Hb_003304_090 Hb_000705_050--Hb_003304_090 Hb_000705_050--Hb_034688_030 Hb_000011_320 Hb_000011_320 Hb_000705_050--Hb_000011_320 Hb_001174_020 Hb_001174_020 Hb_000705_050--Hb_001174_020 Hb_072153_010 Hb_072153_010 Hb_186495_010--Hb_072153_010 Hb_001016_040 Hb_001016_040 Hb_186495_010--Hb_001016_040 Hb_186495_010--Hb_034688_030 Hb_005056_120 Hb_005056_120 Hb_186495_010--Hb_005056_120 Hb_000367_320 Hb_000367_320 Hb_186495_010--Hb_000367_320 Hb_003126_120 Hb_003126_120 Hb_034688_030--Hb_003126_120 Hb_002627_010 Hb_002627_010 Hb_034688_030--Hb_002627_010 Hb_034688_030--Hb_001775_060 Hb_002592_070 Hb_002592_070 Hb_034688_030--Hb_002592_070 Hb_002000_100 Hb_002000_100 Hb_034688_030--Hb_002000_100 Hb_000453_290 Hb_000453_290 Hb_034688_030--Hb_000453_290 Hb_113945_010 Hb_113945_010 Hb_007161_020--Hb_113945_010 Hb_170861_010 Hb_170861_010 Hb_007161_020--Hb_170861_010 Hb_000106_060 Hb_000106_060 Hb_007161_020--Hb_000106_060 Hb_000429_030 Hb_000429_030 Hb_007161_020--Hb_000429_030 Hb_039096_010 Hb_039096_010 Hb_007161_020--Hb_039096_010 Hb_007161_020--Hb_080068_010 Hb_080068_010--Hb_113945_010 Hb_004241_050 Hb_004241_050 Hb_080068_010--Hb_004241_050 Hb_016120_020 Hb_016120_020 Hb_080068_010--Hb_016120_020 Hb_003371_040 Hb_003371_040 Hb_080068_010--Hb_003371_040 Hb_080068_010--Hb_000106_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10898 8.01114 1.07105 37.2314 0.221495 2.30386
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.259812 0 0 13.479 5.11913

CAGE analysis