Hb_000567_300

Information

Type -
Description -
Location Contig567: 354896-355654
Sequence    

Annotation

kegg
ID rcu:RCOM_0303920
description hypothetical protein
nr
ID XP_012081780.1
description PREDICTED: protein YLS9-like [Jatropha curcas]
swissprot
ID Q9SJ52
description Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1
trembl
ID A0A067LEP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07968 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000567_300 0.0 - - PREDICTED: protein YLS9-like [Jatropha curcas]
2 Hb_000061_360 0.0548326006 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
3 Hb_004881_080 0.0960762738 - - PREDICTED: glycerol-3-phosphate acyltransferase 1 [Populus euphratica]
4 Hb_022815_020 0.1207385002 - - PREDICTED: uncharacterized protein LOC105650107 [Jatropha curcas]
5 Hb_000659_010 0.1245575996 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
6 Hb_001172_030 0.1289826312 - - PREDICTED: protein NRT1/ PTR FAMILY 7.2-like isoform X1 [Jatropha curcas]
7 Hb_005550_040 0.1326419651 - - PREDICTED: epoxide hydrolase 4-like [Jatropha curcas]
8 Hb_002218_040 0.134993758 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003189_020 0.1390833499 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
10 Hb_002248_020 0.1437161461 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]
11 Hb_001003_020 0.1438213528 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
12 Hb_000484_040 0.1514099316 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]
13 Hb_001279_220 0.1521048115 - - protein binding protein, putative [Ricinus communis]
14 Hb_029571_010 0.1536644987 - - PREDICTED: polygalacturonase QRT3 [Jatropha curcas]
15 Hb_074892_010 0.1537626747 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
16 Hb_032631_080 0.1543101248 - - PREDICTED: L-Ala-D/L-amino acid epimerase-like isoform X2 [Jatropha curcas]
17 Hb_033843_020 0.1560828257 - - lysosomal alpha-mannosidase, putative [Ricinus communis]
18 Hb_035726_020 0.1637125535 - - Insulinase (Peptidase family M16) family protein [Theobroma cacao]
19 Hb_004222_010 0.1638266692 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
20 Hb_046770_010 0.1651225526 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000567_300 Hb_000567_300 Hb_000061_360 Hb_000061_360 Hb_000567_300--Hb_000061_360 Hb_004881_080 Hb_004881_080 Hb_000567_300--Hb_004881_080 Hb_022815_020 Hb_022815_020 Hb_000567_300--Hb_022815_020 Hb_000659_010 Hb_000659_010 Hb_000567_300--Hb_000659_010 Hb_001172_030 Hb_001172_030 Hb_000567_300--Hb_001172_030 Hb_005550_040 Hb_005550_040 Hb_000567_300--Hb_005550_040 Hb_000061_360--Hb_004881_080 Hb_000061_360--Hb_005550_040 Hb_003189_020 Hb_003189_020 Hb_000061_360--Hb_003189_020 Hb_001949_010 Hb_001949_010 Hb_000061_360--Hb_001949_010 Hb_002218_040 Hb_002218_040 Hb_000061_360--Hb_002218_040 Hb_004881_080--Hb_002218_040 Hb_004881_080--Hb_003189_020 Hb_032631_080 Hb_032631_080 Hb_004881_080--Hb_032631_080 Hb_004881_080--Hb_005550_040 Hb_022815_020--Hb_000659_010 Hb_022815_020--Hb_001172_030 Hb_035726_020 Hb_035726_020 Hb_022815_020--Hb_035726_020 Hb_001003_020 Hb_001003_020 Hb_022815_020--Hb_001003_020 Hb_004222_010 Hb_004222_010 Hb_022815_020--Hb_004222_010 Hb_033843_020 Hb_033843_020 Hb_022815_020--Hb_033843_020 Hb_175968_010 Hb_175968_010 Hb_000659_010--Hb_175968_010 Hb_000659_010--Hb_004222_010 Hb_000659_010--Hb_001003_020 Hb_000659_010--Hb_035726_020 Hb_001279_220 Hb_001279_220 Hb_000659_010--Hb_001279_220 Hb_001172_030--Hb_033843_020 Hb_001172_030--Hb_035726_020 Hb_115414_010 Hb_115414_010 Hb_001172_030--Hb_115414_010 Hb_001172_030--Hb_001003_020 Hb_001172_030--Hb_000659_010 Hb_005550_040--Hb_003189_020 Hb_178703_010 Hb_178703_010 Hb_005550_040--Hb_178703_010 Hb_005550_040--Hb_001949_010 Hb_046770_010 Hb_046770_010 Hb_005550_040--Hb_046770_010 Hb_105134_010 Hb_105134_010 Hb_005550_040--Hb_105134_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0725402 0.0298302 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.600284 0.113659

CAGE analysis