Hb_000568_020

Information

Type -
Description -
Location Contig568: 10036-11380
Sequence    

Annotation

kegg
ID pxb:103937187
description probable aquaporin PIP2-5
nr
ID XP_012093253.1
description PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
swissprot
ID Q6K215
description Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1
trembl
ID A0A067LAW1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20043 PE=3 SV=1
Gene Ontology
ID GO:0016020
description probable aquaporin pip2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000568_020 0.0 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
2 Hb_000834_130 0.0646876051 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002304_100 0.0764138758 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
4 Hb_000243_340 0.0846439397 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
5 Hb_001247_090 0.0879373077 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
6 Hb_005214_050 0.0980275508 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
7 Hb_004031_050 0.099183543 - - sinapyl alcohol dehydrogenase-like protein [Populus tremula x Populus tremuloides]
8 Hb_001645_030 0.1028206326 - - PREDICTED: probable auxin efflux carrier component 1b [Jatropha curcas]
9 Hb_000162_190 0.1047810395 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
10 Hb_002518_020 0.1110862979 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]
11 Hb_002171_020 0.1113587453 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
12 Hb_000334_090 0.1128946067 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
13 Hb_005000_280 0.1167503935 - - PREDICTED: uncharacterized protein LOC105637905 [Jatropha curcas]
14 Hb_001769_070 0.1210006998 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
15 Hb_170077_020 0.1219386321 - - PREDICTED: probable serine incorporator [Jatropha curcas]
16 Hb_000419_140 0.1231787541 - - Aquaporin PIP2.1, putative [Ricinus communis]
17 Hb_178049_010 0.1238327813 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
18 Hb_085829_010 0.1253263146 - - PREDICTED: homeobox protein 2-like [Jatropha curcas]
19 Hb_000339_050 0.1257784897 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
20 Hb_009736_020 0.1277317557 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000568_020 Hb_000568_020 Hb_000834_130 Hb_000834_130 Hb_000568_020--Hb_000834_130 Hb_002304_100 Hb_002304_100 Hb_000568_020--Hb_002304_100 Hb_000243_340 Hb_000243_340 Hb_000568_020--Hb_000243_340 Hb_001247_090 Hb_001247_090 Hb_000568_020--Hb_001247_090 Hb_005214_050 Hb_005214_050 Hb_000568_020--Hb_005214_050 Hb_004031_050 Hb_004031_050 Hb_000568_020--Hb_004031_050 Hb_000834_130--Hb_000243_340 Hb_000419_140 Hb_000419_140 Hb_000834_130--Hb_000419_140 Hb_000076_280 Hb_000076_280 Hb_000834_130--Hb_000076_280 Hb_001645_030 Hb_001645_030 Hb_000834_130--Hb_001645_030 Hb_000834_130--Hb_002304_100 Hb_002304_100--Hb_000243_340 Hb_002304_100--Hb_001645_030 Hb_002304_100--Hb_001247_090 Hb_000339_050 Hb_000339_050 Hb_002304_100--Hb_000339_050 Hb_002601_040 Hb_002601_040 Hb_002304_100--Hb_002601_040 Hb_000243_340--Hb_002601_040 Hb_000243_340--Hb_001645_030 Hb_000243_340--Hb_000339_050 Hb_003216_140 Hb_003216_140 Hb_001247_090--Hb_003216_140 Hb_189208_050 Hb_189208_050 Hb_001247_090--Hb_189208_050 Hb_001247_090--Hb_000834_130 Hb_000152_590 Hb_000152_590 Hb_001247_090--Hb_000152_590 Hb_005214_050--Hb_004031_050 Hb_000373_260 Hb_000373_260 Hb_005214_050--Hb_000373_260 Hb_011355_020 Hb_011355_020 Hb_005214_050--Hb_011355_020 Hb_004970_100 Hb_004970_100 Hb_005214_050--Hb_004970_100 Hb_002897_030 Hb_002897_030 Hb_005214_050--Hb_002897_030 Hb_004031_050--Hb_011355_020 Hb_004031_050--Hb_002897_030 Hb_002522_040 Hb_002522_040 Hb_004031_050--Hb_002522_040 Hb_006026_020 Hb_006026_020 Hb_004031_050--Hb_006026_020 Hb_001198_180 Hb_001198_180 Hb_004031_050--Hb_001198_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.19204 91.2459 256.171 737.382 0.56726 4.06881
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.223564 0 0 135.995 87.0516

CAGE analysis