Hb_000571_020

Information

Type -
Description -
Location Contig571: 17170-20603
Sequence    

Annotation

kegg
ID tcc:TCM_021637
description BCL-2-associated athanogene 4, putative isoform 1
nr
ID XP_012089802.1
description PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]
swissprot
ID Q8RX71
description BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana GN=BAG4 PE=1 SV=1
trembl
ID A0A067JS74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00442 PE=4 SV=1
Gene Ontology
ID GO:0051087
description bag family molecular chaperone regulator 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49354: 17230-20602
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000571_020 0.0 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]
2 Hb_000302_140 0.0582760493 - - PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Jatropha curcas]
3 Hb_001329_150 0.0682840238 - - PREDICTED: autophagy-related protein 8i-like [Jatropha curcas]
4 Hb_000538_120 0.0699728994 transcription factor TF Family: SET PREDICTED: protein SET DOMAIN GROUP 40 [Jatropha curcas]
5 Hb_000254_050 0.0704673182 - - hypothetical protein VITISV_010510 [Vitis vinifera]
6 Hb_000189_240 0.0723246356 - - PREDICTED: PITH domain-containing protein At3g04780 [Jatropha curcas]
7 Hb_000731_190 0.072901728 - - PREDICTED: cardiolipin synthase (CMP-forming), mitochondrial [Jatropha curcas]
8 Hb_008071_020 0.073879289 - - PREDICTED: serine/threonine-protein kinase AFC1 [Jatropha curcas]
9 Hb_000261_140 0.0754027902 - - -
10 Hb_028396_010 0.0764318971 - - PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Vitis vinifera]
11 Hb_000045_310 0.0770588523 - - PREDICTED: probable signal peptidase complex subunit 2 [Jatropha curcas]
12 Hb_026053_020 0.0771575027 - - PREDICTED: uncharacterized protein LOC105643718 [Jatropha curcas]
13 Hb_001341_150 0.0787450304 - - PREDICTED: proteasome subunit beta type-4-like [Jatropha curcas]
14 Hb_027654_050 0.079066421 - - PREDICTED: uncharacterized protein LOC105646592 [Jatropha curcas]
15 Hb_006615_240 0.0790707187 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
16 Hb_004143_150 0.0797532434 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 24-like isoform X6 [Jatropha curcas]
17 Hb_000327_060 0.0801959172 - - PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]
18 Hb_000431_070 0.0802407244 - - Mitochondrial import receptor subunit TOM20, putative [Ricinus communis]
19 Hb_004767_080 0.0804948247 - - PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X1 [Jatropha curcas]
20 Hb_002110_200 0.0806675553 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000571_020 Hb_000571_020 Hb_000302_140 Hb_000302_140 Hb_000571_020--Hb_000302_140 Hb_001329_150 Hb_001329_150 Hb_000571_020--Hb_001329_150 Hb_000538_120 Hb_000538_120 Hb_000571_020--Hb_000538_120 Hb_000254_050 Hb_000254_050 Hb_000571_020--Hb_000254_050 Hb_000189_240 Hb_000189_240 Hb_000571_020--Hb_000189_240 Hb_000731_190 Hb_000731_190 Hb_000571_020--Hb_000731_190 Hb_000302_140--Hb_000538_120 Hb_001341_150 Hb_001341_150 Hb_000302_140--Hb_001341_150 Hb_000085_350 Hb_000085_350 Hb_000302_140--Hb_000085_350 Hb_000413_280 Hb_000413_280 Hb_000302_140--Hb_000413_280 Hb_028396_010 Hb_028396_010 Hb_000302_140--Hb_028396_010 Hb_001053_140 Hb_001053_140 Hb_001329_150--Hb_001053_140 Hb_000419_070 Hb_000419_070 Hb_001329_150--Hb_000419_070 Hb_002000_140 Hb_002000_140 Hb_001329_150--Hb_002000_140 Hb_002303_060 Hb_002303_060 Hb_001329_150--Hb_002303_060 Hb_001329_150--Hb_000189_240 Hb_007894_060 Hb_007894_060 Hb_000538_120--Hb_007894_060 Hb_000136_260 Hb_000136_260 Hb_000538_120--Hb_000136_260 Hb_007928_030 Hb_007928_030 Hb_000538_120--Hb_007928_030 Hb_000538_120--Hb_000413_280 Hb_002110_200 Hb_002110_200 Hb_000254_050--Hb_002110_200 Hb_001512_080 Hb_001512_080 Hb_000254_050--Hb_001512_080 Hb_000016_080 Hb_000016_080 Hb_000254_050--Hb_000016_080 Hb_000789_230 Hb_000789_230 Hb_000254_050--Hb_000789_230 Hb_005269_080 Hb_005269_080 Hb_000254_050--Hb_005269_080 Hb_000826_100 Hb_000826_100 Hb_000189_240--Hb_000826_100 Hb_026053_020 Hb_026053_020 Hb_000189_240--Hb_026053_020 Hb_000189_240--Hb_002000_140 Hb_003605_160 Hb_003605_160 Hb_000189_240--Hb_003605_160 Hb_000189_240--Hb_002303_060 Hb_008071_020 Hb_008071_020 Hb_000189_240--Hb_008071_020 Hb_006478_160 Hb_006478_160 Hb_000731_190--Hb_006478_160 Hb_000417_360 Hb_000417_360 Hb_000731_190--Hb_000417_360 Hb_091433_020 Hb_091433_020 Hb_000731_190--Hb_091433_020 Hb_001979_040 Hb_001979_040 Hb_000731_190--Hb_001979_040 Hb_000035_370 Hb_000035_370 Hb_000731_190--Hb_000035_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.8135 18.9135 36.3492 39.4134 22.199 20.592
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
56.4274 88.8036 49.0199 34.6238 28.2163

CAGE analysis