Hb_000590_040

Information

Type -
Description -
Location Contig590: 43716-45021
Sequence    

Annotation

kegg
ID csv:101226608
description uncharacterized LOC101226608
nr
ID XP_002391368.1
description hypothetical protein MPER_09217 [Moniliophthora perniciosa FA553]
swissprot
ID -
description -
trembl
ID E2LQK3
description Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP02) GN=MPER_09217 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000590_040 0.0 - - hypothetical protein MPER_09217 [Moniliophthora perniciosa FA553]
2 Hb_003540_130 0.2324418288 - - -
3 Hb_000331_150 0.2374507161 - - WD-repeat protein, putative [Ricinus communis]
4 Hb_003069_020 0.2465276639 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004324_350 0.2471072554 - - PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]
6 Hb_002028_100 0.2622456144 - - PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
7 Hb_067188_010 0.2646132007 - - -
8 Hb_000038_030 0.2674964481 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7-like [Glycine max]
9 Hb_085863_020 0.2692031016 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 1 [Jatropha curcas]
10 Hb_000431_020 0.2725594133 - - hypothetical protein JCGZ_06801 [Jatropha curcas]
11 Hb_004650_020 0.2805081331 - - -
12 Hb_000291_280 0.2823269876 - - PREDICTED: LOW QUALITY PROTEIN: myosin-11 [Jatropha curcas]
13 Hb_002289_130 0.2876612487 transcription factor TF Family: C2H2 arsenite inducuble RNA associated protein aip-1, putative [Ricinus communis]
14 Hb_011063_020 0.2932933037 - - PREDICTED: ribosomal L1 domain-containing protein 1-like [Jatropha curcas]
15 Hb_010317_020 0.2955149837 - - PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Jatropha curcas]
16 Hb_022148_010 0.2973530165 - - PREDICTED: uncharacterized protein LOC105638910 [Jatropha curcas]
17 Hb_011218_060 0.2993898466 - - PREDICTED: dephospho-CoA kinase-like [Jatropha curcas]
18 Hb_006029_020 0.2994098621 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1, partial [Vitis vinifera]
19 Hb_000483_420 0.2999304632 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
20 Hb_127003_010 0.3012343077 - - PREDICTED: uncharacterized protein LOC105633613 [Jatropha curcas]

Gene co-expression network

sample Hb_000590_040 Hb_000590_040 Hb_003540_130 Hb_003540_130 Hb_000590_040--Hb_003540_130 Hb_000331_150 Hb_000331_150 Hb_000590_040--Hb_000331_150 Hb_003069_020 Hb_003069_020 Hb_000590_040--Hb_003069_020 Hb_004324_350 Hb_004324_350 Hb_000590_040--Hb_004324_350 Hb_002028_100 Hb_002028_100 Hb_000590_040--Hb_002028_100 Hb_067188_010 Hb_067188_010 Hb_000590_040--Hb_067188_010 Hb_000483_420 Hb_000483_420 Hb_003540_130--Hb_000483_420 Hb_001004_040 Hb_001004_040 Hb_003540_130--Hb_001004_040 Hb_085863_020 Hb_085863_020 Hb_003540_130--Hb_085863_020 Hb_003747_130 Hb_003747_130 Hb_003540_130--Hb_003747_130 Hb_019654_080 Hb_019654_080 Hb_003540_130--Hb_019654_080 Hb_000038_030 Hb_000038_030 Hb_000331_150--Hb_000038_030 Hb_000291_280 Hb_000291_280 Hb_000331_150--Hb_000291_280 Hb_000331_150--Hb_003069_020 Hb_000397_070 Hb_000397_070 Hb_000331_150--Hb_000397_070 Hb_011218_060 Hb_011218_060 Hb_000331_150--Hb_011218_060 Hb_000331_150--Hb_067188_010 Hb_003069_020--Hb_004324_350 Hb_070926_010 Hb_070926_010 Hb_003069_020--Hb_070926_010 Hb_001766_100 Hb_001766_100 Hb_003069_020--Hb_001766_100 Hb_000684_370 Hb_000684_370 Hb_003069_020--Hb_000684_370 Hb_000380_180 Hb_000380_180 Hb_004324_350--Hb_000380_180 Hb_001488_100 Hb_001488_100 Hb_004324_350--Hb_001488_100 Hb_001767_010 Hb_001767_010 Hb_004324_350--Hb_001767_010 Hb_002498_060 Hb_002498_060 Hb_004324_350--Hb_002498_060 Hb_002739_110 Hb_002739_110 Hb_004324_350--Hb_002739_110 Hb_000249_130 Hb_000249_130 Hb_004324_350--Hb_000249_130 Hb_002733_030 Hb_002733_030 Hb_002028_100--Hb_002733_030 Hb_002232_450 Hb_002232_450 Hb_002028_100--Hb_002232_450 Hb_015707_010 Hb_015707_010 Hb_002028_100--Hb_015707_010 Hb_097968_010 Hb_097968_010 Hb_002028_100--Hb_097968_010 Hb_025457_010 Hb_025457_010 Hb_002028_100--Hb_025457_010 Hb_067188_010--Hb_000038_030 Hb_067188_010--Hb_004324_350 Hb_099864_010 Hb_099864_010 Hb_067188_010--Hb_099864_010 Hb_004306_070 Hb_004306_070 Hb_067188_010--Hb_004306_070 Hb_022148_010 Hb_022148_010 Hb_067188_010--Hb_022148_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.45104 0.172641 0.026823 0.0977466 19.0575 10.3873
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.388653 1.22292 39.0858 2.86397 0.887553

CAGE analysis