Hb_000600_070

Information

Type -
Description -
Location Contig600: 84353-90676
Sequence    

Annotation

kegg
ID rcu:RCOM_0623200
description leucine aminopeptidase, putative (EC:3.4.11.5)
nr
ID XP_012071507.1
description PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
swissprot
ID Q944P7
description Leucine aminopeptidase 3, chloroplastic OS=Arabidopsis thaliana GN=At4g30920 PE=2 SV=2
trembl
ID A0A067L3M2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04032 PE=3 SV=1
Gene Ontology
ID GO:0005737
description leucine aminopeptidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50552: 84389-90645 , PASA_asmbl_50553: 84904-90645 , PASA_asmbl_50554: 84904-90645
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000600_070 0.0 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
2 Hb_009535_020 0.053946317 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
3 Hb_000743_040 0.0559473234 - - ribosomal RNA methyltransferase, putative [Ricinus communis]
4 Hb_000347_130 0.0593316845 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]
5 Hb_000567_050 0.0596436284 - - PREDICTED: UBP1-associated protein 2C [Jatropha curcas]
6 Hb_003428_070 0.0653193063 - - DEAD-box ATP-dependent RNA helicase 46 -like protein [Gossypium arboreum]
7 Hb_000023_190 0.0653219731 - - PREDICTED: eukaryotic translation initiation factor 3 subunit B-like [Jatropha curcas]
8 Hb_002027_270 0.0684976239 - - PREDICTED: serine/threonine-protein phosphatase BSL1 [Jatropha curcas]
9 Hb_000283_070 0.0703817566 - - PREDICTED: T-complex protein 1 subunit delta [Jatropha curcas]
10 Hb_000059_150 0.0705683428 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 2 [Theobroma cacao]
11 Hb_003966_030 0.0712262831 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X7 [Jatropha curcas]
12 Hb_005494_020 0.0749550591 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
13 Hb_000329_090 0.0756461529 - - arginase, putative [Ricinus communis]
14 Hb_000160_290 0.0774233544 - - unnamed protein product [Vitis vinifera]
15 Hb_016898_010 0.0775430024 - - PREDICTED: uncharacterized protein PFB0145c [Jatropha curcas]
16 Hb_011716_020 0.0775993414 - - PREDICTED: uncharacterized protein LOC105637783 [Jatropha curcas]
17 Hb_003362_070 0.0777515089 - - PREDICTED: methyltransferase-like protein 13 [Jatropha curcas]
18 Hb_028639_010 0.0786543153 - - transporter, putative [Ricinus communis]
19 Hb_003044_020 0.0804464435 - - PREDICTED: uncharacterized protein LOC105641479 [Jatropha curcas]
20 Hb_003464_020 0.0807723937 - - srpk, putative [Ricinus communis]

Gene co-expression network

sample Hb_000600_070 Hb_000600_070 Hb_009535_020 Hb_009535_020 Hb_000600_070--Hb_009535_020 Hb_000743_040 Hb_000743_040 Hb_000600_070--Hb_000743_040 Hb_000347_130 Hb_000347_130 Hb_000600_070--Hb_000347_130 Hb_000567_050 Hb_000567_050 Hb_000600_070--Hb_000567_050 Hb_003428_070 Hb_003428_070 Hb_000600_070--Hb_003428_070 Hb_000023_190 Hb_000023_190 Hb_000600_070--Hb_000023_190 Hb_009535_020--Hb_000023_190 Hb_028487_110 Hb_028487_110 Hb_009535_020--Hb_028487_110 Hb_028639_010 Hb_028639_010 Hb_009535_020--Hb_028639_010 Hb_004218_240 Hb_004218_240 Hb_009535_020--Hb_004218_240 Hb_009535_020--Hb_000567_050 Hb_000329_090 Hb_000329_090 Hb_000743_040--Hb_000329_090 Hb_000743_040--Hb_003428_070 Hb_000743_040--Hb_000567_050 Hb_000072_350 Hb_000072_350 Hb_000743_040--Hb_000072_350 Hb_010381_060 Hb_010381_060 Hb_000743_040--Hb_010381_060 Hb_003966_030 Hb_003966_030 Hb_000347_130--Hb_003966_030 Hb_000567_010 Hb_000567_010 Hb_000347_130--Hb_000567_010 Hb_005494_020 Hb_005494_020 Hb_000347_130--Hb_005494_020 Hb_025012_010 Hb_025012_010 Hb_000347_130--Hb_025012_010 Hb_000347_130--Hb_003428_070 Hb_000567_050--Hb_003428_070 Hb_000567_050--Hb_000023_190 Hb_002044_060 Hb_002044_060 Hb_000567_050--Hb_002044_060 Hb_000567_050--Hb_010381_060 Hb_016898_010 Hb_016898_010 Hb_003428_070--Hb_016898_010 Hb_000101_240 Hb_000101_240 Hb_003428_070--Hb_000101_240 Hb_000820_170 Hb_000820_170 Hb_003428_070--Hb_000820_170 Hb_000173_510 Hb_000173_510 Hb_003428_070--Hb_000173_510 Hb_003464_020 Hb_003464_020 Hb_000023_190--Hb_003464_020 Hb_000023_190--Hb_004218_240 Hb_000023_190--Hb_010381_060 Hb_001488_410 Hb_001488_410 Hb_000023_190--Hb_001488_410 Hb_021409_170 Hb_021409_170 Hb_000023_190--Hb_021409_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
72.5139 58.6642 24.3751 53.3141 101.929 133.002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
62.8511 29.7855 52.4034 59.9266 42.4973

CAGE analysis