Hb_000603_240

Information

Type -
Description -
Location Contig603: 277063-279577
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000603_240 0.0 - - -
2 Hb_000284_160 0.1881887859 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
3 Hb_027751_040 0.234753916 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
4 Hb_027751_030 0.2456577602 - - -
5 Hb_026766_010 0.2597243152 - - -
6 Hb_003335_070 0.2706962379 - - -
7 Hb_002843_190 0.2747468869 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 7 isoform X1 [Jatropha curcas]
8 Hb_001993_020 0.2814867425 - - hypothetical protein JCGZ_02641 [Jatropha curcas]
9 Hb_005396_040 0.2933309135 - - ABC transporter family protein [Hevea brasiliensis]
10 Hb_004584_010 0.2956841624 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
11 Hb_007336_040 0.29678964 - - protein binding protein, putative [Ricinus communis]
12 Hb_003745_010 0.2969994237 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
13 Hb_000614_330 0.2986546627 - - hypothetical protein POPTR_0008s18070g [Populus trichocarpa]
14 Hb_003992_120 0.3013704662 - - hypothetical protein MTR_6g089560 [Medicago truncatula]
15 Hb_007849_030 0.304161212 - - l-allo-threonine aldolase, putative [Ricinus communis]
16 Hb_000699_120 0.3057084144 - - DNA-binding family protein [Populus trichocarpa]
17 Hb_003756_010 0.3057956487 - - PREDICTED: uncharacterized protein LOC105642108 [Jatropha curcas]
18 Hb_012347_010 0.3060084541 transcription factor TF Family: AP2 hypothetical protein JCGZ_03155 [Jatropha curcas]
19 Hb_005410_030 0.3075960386 - - glutaredoxin 2 [Hevea brasiliensis]
20 Hb_124315_040 0.3144938024 - - hypothetical protein 19 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000603_240 Hb_000603_240 Hb_000284_160 Hb_000284_160 Hb_000603_240--Hb_000284_160 Hb_027751_040 Hb_027751_040 Hb_000603_240--Hb_027751_040 Hb_027751_030 Hb_027751_030 Hb_000603_240--Hb_027751_030 Hb_026766_010 Hb_026766_010 Hb_000603_240--Hb_026766_010 Hb_003335_070 Hb_003335_070 Hb_000603_240--Hb_003335_070 Hb_002843_190 Hb_002843_190 Hb_000603_240--Hb_002843_190 Hb_000284_160--Hb_027751_030 Hb_000284_160--Hb_026766_010 Hb_000284_160--Hb_027751_040 Hb_000614_330 Hb_000614_330 Hb_000284_160--Hb_000614_330 Hb_001993_020 Hb_001993_020 Hb_000284_160--Hb_001993_020 Hb_003745_010 Hb_003745_010 Hb_027751_040--Hb_003745_010 Hb_027751_040--Hb_002843_190 Hb_027751_040--Hb_027751_030 Hb_012662_010 Hb_012662_010 Hb_027751_040--Hb_012662_010 Hb_027751_040--Hb_001993_020 Hb_003756_010 Hb_003756_010 Hb_027751_040--Hb_003756_010 Hb_027751_030--Hb_002843_190 Hb_002094_020 Hb_002094_020 Hb_027751_030--Hb_002094_020 Hb_027751_030--Hb_026766_010 Hb_001230_010 Hb_001230_010 Hb_027751_030--Hb_001230_010 Hb_003992_120 Hb_003992_120 Hb_026766_010--Hb_003992_120 Hb_004584_010 Hb_004584_010 Hb_026766_010--Hb_004584_010 Hb_026766_010--Hb_000614_330 Hb_000699_120 Hb_000699_120 Hb_003335_070--Hb_000699_120 Hb_105712_010 Hb_105712_010 Hb_003335_070--Hb_105712_010 Hb_000002_390 Hb_000002_390 Hb_003335_070--Hb_000002_390 Hb_010589_110 Hb_010589_110 Hb_003335_070--Hb_010589_110 Hb_005321_030 Hb_005321_030 Hb_003335_070--Hb_005321_030 Hb_028365_010 Hb_028365_010 Hb_002843_190--Hb_028365_010 Hb_010128_110 Hb_010128_110 Hb_002843_190--Hb_010128_110 Hb_002843_190--Hb_003992_120 Hb_001980_020 Hb_001980_020 Hb_002843_190--Hb_001980_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
73.1422 0.508783 0.466091 1.19952 1.56751 0.840055
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.0069 16.3282 9.59964 0.139907 0.653265

CAGE analysis