Hb_000608_020

Information

Type -
Description -
Location Contig608: 9375-11877
Sequence    

Annotation

kegg
ID rcu:RCOM_1078700
description hypothetical protein
nr
ID XP_012085904.1
description PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
swissprot
ID Q9S9M5
description Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=2 SV=1
trembl
ID A0A067KB78
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19238 PE=3 SV=1
Gene Ontology
ID GO:0000166
description wall-associated receptor kinase-like 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50812: 11635-11977
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000608_020 0.0 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
2 Hb_002660_100 0.1374825028 - - plasma membrane intrinsic protein [Hevea brasiliensis]
3 Hb_001377_500 0.154472644 - - DOF AFFECTING GERMINATION 2 family protein [Populus trichocarpa]
4 Hb_000429_110 0.1596806955 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein WIP2-like [Populus euphratica]
5 Hb_001558_070 0.1617834003 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
6 Hb_001259_100 0.1666719438 - - chloride channel-like family protein [Populus trichocarpa]
7 Hb_002928_180 0.1735417826 - - catalase CAT1 [Manihot esculenta]
8 Hb_000977_090 0.1736891116 - - hypothetical protein POPTR_0010s18550g [Populus trichocarpa]
9 Hb_000685_060 0.1765352749 - - ring finger protein, putative [Ricinus communis]
10 Hb_068332_010 0.1773360178 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_124315_030 0.1779140256 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
12 Hb_001481_020 0.1788982164 - - PREDICTED: L-type lectin-domain containing receptor kinase V.9-like [Jatropha curcas]
13 Hb_052764_080 0.1805920617 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Jatropha curcas]
14 Hb_002035_030 0.1823024813 - - hypothetical protein PRUPE_ppa003221mg [Prunus persica]
15 Hb_003453_030 0.1864421689 - - hypothetical protein JCGZ_26893 [Jatropha curcas]
16 Hb_001195_500 0.1866574233 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
17 Hb_001355_070 0.1895257307 - - P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative isoform 2 [Theobroma cacao]
18 Hb_006925_070 0.1930001846 - - hypothetical protein JCGZ_20652 [Jatropha curcas]
19 Hb_010381_110 0.1932799468 - - PRA1 family protein [Theobroma cacao]
20 Hb_001454_360 0.1944113134 - - PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]

Gene co-expression network

sample Hb_000608_020 Hb_000608_020 Hb_002660_100 Hb_002660_100 Hb_000608_020--Hb_002660_100 Hb_001377_500 Hb_001377_500 Hb_000608_020--Hb_001377_500 Hb_000429_110 Hb_000429_110 Hb_000608_020--Hb_000429_110 Hb_001558_070 Hb_001558_070 Hb_000608_020--Hb_001558_070 Hb_001259_100 Hb_001259_100 Hb_000608_020--Hb_001259_100 Hb_002928_180 Hb_002928_180 Hb_000608_020--Hb_002928_180 Hb_004195_170 Hb_004195_170 Hb_002660_100--Hb_004195_170 Hb_051100_010 Hb_051100_010 Hb_002660_100--Hb_051100_010 Hb_165130_010 Hb_165130_010 Hb_002660_100--Hb_165130_010 Hb_001148_040 Hb_001148_040 Hb_002660_100--Hb_001148_040 Hb_002660_100--Hb_000429_110 Hb_001195_500 Hb_001195_500 Hb_001377_500--Hb_001195_500 Hb_002035_030 Hb_002035_030 Hb_001377_500--Hb_002035_030 Hb_000000_140 Hb_000000_140 Hb_001377_500--Hb_000000_140 Hb_002609_150 Hb_002609_150 Hb_001377_500--Hb_002609_150 Hb_002272_140 Hb_002272_140 Hb_001377_500--Hb_002272_140 Hb_000429_110--Hb_002928_180 Hb_052764_080 Hb_052764_080 Hb_000429_110--Hb_052764_080 Hb_000429_110--Hb_001259_100 Hb_002928_120 Hb_002928_120 Hb_000429_110--Hb_002928_120 Hb_010174_190 Hb_010174_190 Hb_000429_110--Hb_010174_190 Hb_001355_070 Hb_001355_070 Hb_000429_110--Hb_001355_070 Hb_001862_170 Hb_001862_170 Hb_001558_070--Hb_001862_170 Hb_001454_360 Hb_001454_360 Hb_001558_070--Hb_001454_360 Hb_001558_070--Hb_000429_110 Hb_008948_060 Hb_008948_060 Hb_001558_070--Hb_008948_060 Hb_073171_010 Hb_073171_010 Hb_001558_070--Hb_073171_010 Hb_001259_100--Hb_073171_010 Hb_001259_100--Hb_052764_080 Hb_005183_200 Hb_005183_200 Hb_001259_100--Hb_005183_200 Hb_004044_030 Hb_004044_030 Hb_001259_100--Hb_004044_030 Hb_010381_110 Hb_010381_110 Hb_001259_100--Hb_010381_110 Hb_000236_110 Hb_000236_110 Hb_002928_180--Hb_000236_110 Hb_000778_020 Hb_000778_020 Hb_002928_180--Hb_000778_020 Hb_002928_180--Hb_002928_120 Hb_002928_180--Hb_010174_190 Hb_001410_010 Hb_001410_010 Hb_002928_180--Hb_001410_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.708378 18.5563 2.73448 8.2822 0.14863 0.319357
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.848522 0.546279 2.13694 11.0159 0.482901

CAGE analysis