Hb_000608_150

Information

Type transcription factor
Description TF Family: WRKY
Location Contig608: 64814-68927
Sequence    

Annotation

kegg
ID rcu:RCOM_1078530
description WRKY transcription factor, putative
nr
ID XP_012085758.1
description PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9FG77
description Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1
trembl
ID M9TNR1
description Uncharacterized protein OS=Jatropha curcas GN=WRKY10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000608_150 0.0 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
2 Hb_001819_020 0.1587845853 - - PREDICTED: uncharacterized protein LOC105641890 isoform X1 [Jatropha curcas]
3 Hb_001545_010 0.1610728085 - - PREDICTED: serine/threonine-protein kinase TNNI3K-like [Cucumis sativus]
4 Hb_001231_010 0.1644805664 - - calcium-binding family protein [Populus trichocarpa]
5 Hb_145745_040 0.177054522 - - Cell wall-associated hydrolase [Medicago truncatula]
6 Hb_000083_080 0.1804541218 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
7 Hb_001728_110 0.1940760327 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF039-like [Jatropha curcas]
8 Hb_125573_010 0.1968485554 - - ATP-binding cassette transporter, putative [Ricinus communis]
9 Hb_000008_070 0.2006930353 - - kinase, putative [Ricinus communis]
10 Hb_004220_010 0.2012067834 - - PREDICTED: uncharacterized protein LOC105642366 [Jatropha curcas]
11 Hb_003371_050 0.2036645242 - - conserved hypothetical protein [Ricinus communis]
12 Hb_010683_030 0.2044113558 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000086_540 0.2058580488 - - -
14 Hb_000904_120 0.2088570309 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006816_490 0.2110165269 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Jatropha curcas]
16 Hb_000832_270 0.214368937 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000032_360 0.2159266639 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Jatropha curcas]
18 Hb_000130_140 0.2185572914 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105639203 isoform X1 [Jatropha curcas]
19 Hb_002869_060 0.2200475104 - - PREDICTED: kinesin-related protein 4 [Jatropha curcas]
20 Hb_000270_100 0.222787887 - - ATPase 4, plasma membrane-type -like protein [Gossypium arboreum]

Gene co-expression network

sample Hb_000608_150 Hb_000608_150 Hb_001819_020 Hb_001819_020 Hb_000608_150--Hb_001819_020 Hb_001545_010 Hb_001545_010 Hb_000608_150--Hb_001545_010 Hb_001231_010 Hb_001231_010 Hb_000608_150--Hb_001231_010 Hb_145745_040 Hb_145745_040 Hb_000608_150--Hb_145745_040 Hb_000083_080 Hb_000083_080 Hb_000608_150--Hb_000083_080 Hb_001728_110 Hb_001728_110 Hb_000608_150--Hb_001728_110 Hb_005784_010 Hb_005784_010 Hb_001819_020--Hb_005784_010 Hb_001951_080 Hb_001951_080 Hb_001819_020--Hb_001951_080 Hb_000345_550 Hb_000345_550 Hb_001819_020--Hb_000345_550 Hb_012484_050 Hb_012484_050 Hb_001819_020--Hb_012484_050 Hb_004223_060 Hb_004223_060 Hb_001819_020--Hb_004223_060 Hb_001032_020 Hb_001032_020 Hb_001819_020--Hb_001032_020 Hb_000904_120 Hb_000904_120 Hb_001545_010--Hb_000904_120 Hb_003723_050 Hb_003723_050 Hb_001545_010--Hb_003723_050 Hb_125573_010 Hb_125573_010 Hb_001545_010--Hb_125573_010 Hb_000684_070 Hb_000684_070 Hb_001545_010--Hb_000684_070 Hb_147028_010 Hb_147028_010 Hb_001545_010--Hb_147028_010 Hb_000832_270 Hb_000832_270 Hb_001231_010--Hb_000832_270 Hb_000327_260 Hb_000327_260 Hb_001231_010--Hb_000327_260 Hb_000539_040 Hb_000539_040 Hb_001231_010--Hb_000539_040 Hb_001231_010--Hb_001728_110 Hb_007479_010 Hb_007479_010 Hb_001231_010--Hb_007479_010 Hb_137222_010 Hb_137222_010 Hb_001231_010--Hb_137222_010 Hb_003371_050 Hb_003371_050 Hb_145745_040--Hb_003371_050 Hb_000331_050 Hb_000331_050 Hb_145745_040--Hb_000331_050 Hb_000120_630 Hb_000120_630 Hb_145745_040--Hb_000120_630 Hb_003388_070 Hb_003388_070 Hb_145745_040--Hb_003388_070 Hb_000085_010 Hb_000085_010 Hb_145745_040--Hb_000085_010 Hb_000130_140 Hb_000130_140 Hb_000083_080--Hb_000130_140 Hb_003580_050 Hb_003580_050 Hb_000083_080--Hb_003580_050 Hb_000417_050 Hb_000417_050 Hb_000083_080--Hb_000417_050 Hb_000333_030 Hb_000333_030 Hb_000083_080--Hb_000333_030 Hb_002662_110 Hb_002662_110 Hb_000083_080--Hb_002662_110 Hb_001936_190 Hb_001936_190 Hb_000083_080--Hb_001936_190 Hb_001421_040 Hb_001421_040 Hb_001728_110--Hb_001421_040 Hb_003177_050 Hb_003177_050 Hb_001728_110--Hb_003177_050 Hb_005488_190 Hb_005488_190 Hb_001728_110--Hb_005488_190 Hb_000373_200 Hb_000373_200 Hb_001728_110--Hb_000373_200 Hb_000679_080 Hb_000679_080 Hb_001728_110--Hb_000679_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0214189 0.0301062 0.226525 0.23184 0 0.077029
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00762776 0.24244

CAGE analysis