Hb_000608_220

Information

Type -
Description -
Location Contig608: 91934-95524
Sequence    

Annotation

kegg
ID rcu:RCOM_1078480
description serine/threonine-protein kinase bri1, putative (EC:1.3.1.74)
nr
ID XP_002514847.1
description serine/threonine-protein kinase bri1, putative [Ricinus communis]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID B9RM78
description Serine/threonine-protein kinase bri1, putative OS=Ricinus communis GN=RCOM_1078480 PE=4 SV=1
Gene Ontology
ID GO:0016301
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50833: 96496-98263
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000608_220 0.0 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
2 Hb_010889_020 0.1873748178 - - -
3 Hb_000933_100 0.2481053437 - - conserved hypothetical protein [Ricinus communis]
4 Hb_027402_080 0.2490481444 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
5 Hb_001143_240 0.2522021867 - - 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
6 Hb_000051_050 0.2614466305 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
7 Hb_004945_020 0.2657533004 - - PREDICTED: probable calcium-binding protein CML30 [Vitis vinifera]
8 Hb_144096_010 0.2668572087 - - aldo-keto reductase, putative [Ricinus communis]
9 Hb_005675_060 0.2722134129 - - PREDICTED: protein NIM1-INTERACTING 2 [Jatropha curcas]
10 Hb_131864_030 0.2801204326 transcription factor TF Family: C2H2 transcription factor, putative [Ricinus communis]
11 Hb_000190_190 0.2882334595 - - PREDICTED: BI1-like protein [Gossypium raimondii]
12 Hb_000012_210 0.2934039246 - - PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Jatropha curcas]
13 Hb_019641_030 0.2952672818 - - chitin elicitor receptor kinase 1 [Chrysanthemum boreale]
14 Hb_000152_510 0.2988790775 - - kinase, putative [Ricinus communis]
15 Hb_000784_080 0.2993831173 - - protein disulfide isomerase, putative [Ricinus communis]
16 Hb_001277_360 0.2995273802 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]
17 Hb_026549_010 0.301379889 - - -
18 Hb_002217_470 0.3019033758 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
19 Hb_027634_030 0.3025955363 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
20 Hb_002391_360 0.3029042971 - - hypothetical protein CICLE_v10026208mg [Citrus clementina]

Gene co-expression network

sample Hb_000608_220 Hb_000608_220 Hb_010889_020 Hb_010889_020 Hb_000608_220--Hb_010889_020 Hb_000933_100 Hb_000933_100 Hb_000608_220--Hb_000933_100 Hb_027402_080 Hb_027402_080 Hb_000608_220--Hb_027402_080 Hb_001143_240 Hb_001143_240 Hb_000608_220--Hb_001143_240 Hb_000051_050 Hb_000051_050 Hb_000608_220--Hb_000051_050 Hb_004945_020 Hb_004945_020 Hb_000608_220--Hb_004945_020 Hb_010889_020--Hb_027402_080 Hb_001554_010 Hb_001554_010 Hb_010889_020--Hb_001554_010 Hb_144096_010 Hb_144096_010 Hb_010889_020--Hb_144096_010 Hb_002876_160 Hb_002876_160 Hb_010889_020--Hb_002876_160 Hb_000384_110 Hb_000384_110 Hb_010889_020--Hb_000384_110 Hb_004635_130 Hb_004635_130 Hb_000933_100--Hb_004635_130 Hb_002316_130 Hb_002316_130 Hb_000933_100--Hb_002316_130 Hb_000190_190 Hb_000190_190 Hb_000933_100--Hb_000190_190 Hb_004137_100 Hb_004137_100 Hb_000933_100--Hb_004137_100 Hb_006816_170 Hb_006816_170 Hb_000933_100--Hb_006816_170 Hb_002391_360 Hb_002391_360 Hb_000933_100--Hb_002391_360 Hb_027402_080--Hb_001554_010 Hb_000661_060 Hb_000661_060 Hb_027402_080--Hb_000661_060 Hb_002131_040 Hb_002131_040 Hb_027402_080--Hb_002131_040 Hb_027402_080--Hb_000933_100 Hb_001143_240--Hb_144096_010 Hb_007645_120 Hb_007645_120 Hb_001143_240--Hb_007645_120 Hb_003025_050 Hb_003025_050 Hb_001143_240--Hb_003025_050 Hb_005548_020 Hb_005548_020 Hb_001143_240--Hb_005548_020 Hb_031527_070 Hb_031527_070 Hb_001143_240--Hb_031527_070 Hb_027634_030 Hb_027634_030 Hb_001143_240--Hb_027634_030 Hb_178051_070 Hb_178051_070 Hb_000051_050--Hb_178051_070 Hb_030736_070 Hb_030736_070 Hb_000051_050--Hb_030736_070 Hb_000009_330 Hb_000009_330 Hb_000051_050--Hb_000009_330 Hb_000169_170 Hb_000169_170 Hb_000051_050--Hb_000169_170 Hb_000237_190 Hb_000237_190 Hb_000051_050--Hb_000237_190 Hb_003666_020 Hb_003666_020 Hb_000051_050--Hb_003666_020 Hb_001214_150 Hb_001214_150 Hb_004945_020--Hb_001214_150 Hb_005946_120 Hb_005946_120 Hb_004945_020--Hb_005946_120 Hb_002631_220 Hb_002631_220 Hb_004945_020--Hb_002631_220 Hb_005675_060 Hb_005675_060 Hb_004945_020--Hb_005675_060 Hb_131864_030 Hb_131864_030 Hb_004945_020--Hb_131864_030 Hb_126648_010 Hb_126648_010 Hb_004945_020--Hb_126648_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00839807 0.0650994 0.0691384 0.0732234 0.13015 0.0146869
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0300076 0.0285596 0.077496 0

CAGE analysis