Hb_000608_300

Information

Type -
Description -
Location Contig608: 145004-146947
Sequence    

Annotation

kegg
ID rcu:RCOM_1077790
description Trichohyalin, putative
nr
ID XP_012085780.1
description PREDICTED: protein KRI1 homolog [Jatropha curcas]
swissprot
ID Q8N9T8
description Protein KRI1 homolog OS=Homo sapiens GN=KRI1 PE=1 SV=3
trembl
ID A0A067JVQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18041 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000608_300 0.0 - - PREDICTED: protein KRI1 homolog [Jatropha curcas]
2 Hb_004306_030 0.056691178 - - PREDICTED: GPI transamidase component PIG-S [Jatropha curcas]
3 Hb_001789_040 0.063691817 - - PREDICTED: uncharacterized protein LOC105648457 isoform X2 [Jatropha curcas]
4 Hb_000568_050 0.0691054539 - - PREDICTED: endoplasmic reticulum metallopeptidase 1 isoform X2 [Jatropha curcas]
5 Hb_002600_060 0.0707505435 - - PREDICTED: putative nuclear matrix constituent protein 1-like protein [Jatropha curcas]
6 Hb_005211_020 0.0749517768 - - PREDICTED: serine/threonine-protein kinase prpf4B-like isoform X1 [Jatropha curcas]
7 Hb_012055_110 0.0762505411 - - tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
8 Hb_000925_090 0.0768319934 - - PREDICTED: uncharacterized protein LOC105635805 isoform X1 [Jatropha curcas]
9 Hb_001133_030 0.0779146625 - - PREDICTED: MAG2-interacting protein 2-like [Jatropha curcas]
10 Hb_001244_150 0.0785068418 - - transformer serine/arginine-rich ribonucleoprotein [Populus trichocarpa]
11 Hb_000059_230 0.0788837906 - - PREDICTED: uncharacterized protein LOC105648049 [Jatropha curcas]
12 Hb_006839_010 0.0792547736 - - PREDICTED: importin subunit beta-1-like [Jatropha curcas]
13 Hb_011174_020 0.0796892465 - - PREDICTED: uncharacterized protein LOC105632610 [Jatropha curcas]
14 Hb_012244_020 0.0802310501 - - calpain, putative [Ricinus communis]
15 Hb_012760_100 0.082350047 - - Pre-rRNA-processing protein ESF1, putative [Ricinus communis]
16 Hb_005215_010 0.0828267692 - - PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Jatropha curcas]
17 Hb_001623_280 0.0846023029 - - PREDICTED: chaperonin CPN60-2, mitochondrial [Jatropha curcas]
18 Hb_009486_170 0.0862137421 - - PREDICTED: eukaryotic translation initiation factor 4G [Jatropha curcas]
19 Hb_000363_300 0.0873412036 - - PREDICTED: protein ENHANCED DOWNY MILDEW 2 isoform X1 [Jatropha curcas]
20 Hb_000331_560 0.087391114 transcription factor TF Family: C2H2 PREDICTED: lysine-specific demethylase REF6 [Jatropha curcas]

Gene co-expression network

sample Hb_000608_300 Hb_000608_300 Hb_004306_030 Hb_004306_030 Hb_000608_300--Hb_004306_030 Hb_001789_040 Hb_001789_040 Hb_000608_300--Hb_001789_040 Hb_000568_050 Hb_000568_050 Hb_000608_300--Hb_000568_050 Hb_002600_060 Hb_002600_060 Hb_000608_300--Hb_002600_060 Hb_005211_020 Hb_005211_020 Hb_000608_300--Hb_005211_020 Hb_012055_110 Hb_012055_110 Hb_000608_300--Hb_012055_110 Hb_004306_030--Hb_001789_040 Hb_004306_030--Hb_000568_050 Hb_001244_150 Hb_001244_150 Hb_004306_030--Hb_001244_150 Hb_004306_030--Hb_012055_110 Hb_000011_270 Hb_000011_270 Hb_004306_030--Hb_000011_270 Hb_005402_040 Hb_005402_040 Hb_001789_040--Hb_005402_040 Hb_027472_220 Hb_027472_220 Hb_001789_040--Hb_027472_220 Hb_000025_710 Hb_000025_710 Hb_001789_040--Hb_000025_710 Hb_002631_140 Hb_002631_140 Hb_001789_040--Hb_002631_140 Hb_011174_020 Hb_011174_020 Hb_000568_050--Hb_011174_020 Hb_000568_050--Hb_012055_110 Hb_006663_060 Hb_006663_060 Hb_000568_050--Hb_006663_060 Hb_000568_050--Hb_000011_270 Hb_000826_070 Hb_000826_070 Hb_000568_050--Hb_000826_070 Hb_000331_560 Hb_000331_560 Hb_002600_060--Hb_000331_560 Hb_000925_090 Hb_000925_090 Hb_002600_060--Hb_000925_090 Hb_002600_060--Hb_005211_020 Hb_001133_030 Hb_001133_030 Hb_002600_060--Hb_001133_030 Hb_005488_170 Hb_005488_170 Hb_002600_060--Hb_005488_170 Hb_000083_070 Hb_000083_070 Hb_002600_060--Hb_000083_070 Hb_005211_020--Hb_000826_070 Hb_002973_110 Hb_002973_110 Hb_005211_020--Hb_002973_110 Hb_013459_020 Hb_013459_020 Hb_005211_020--Hb_013459_020 Hb_005211_020--Hb_000925_090 Hb_002007_110 Hb_002007_110 Hb_012055_110--Hb_002007_110 Hb_000066_150 Hb_000066_150 Hb_012055_110--Hb_000066_150 Hb_000879_040 Hb_000879_040 Hb_012055_110--Hb_000879_040 Hb_000958_050 Hb_000958_050 Hb_012055_110--Hb_000958_050 Hb_002357_070 Hb_002357_070 Hb_012055_110--Hb_002357_070 Hb_005701_050 Hb_005701_050 Hb_012055_110--Hb_005701_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.7158 19.9868 12.4365 16.2666 21.0745 15.4306
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.12729 8.24691 8.33418 19.1954 32.2351

CAGE analysis