Hb_000614_070

Information

Type -
Description -
Location Contig614: 60896-62431
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_070 0.0 - - -
2 Hb_025087_010 0.1080934601 - - PREDICTED: RING-H2 finger protein ATL56 [Jatropha curcas]
3 Hb_006132_060 0.1111614596 - - phospholipid/glycerol acyltransferase family protein [Populus trichocarpa]
4 Hb_000787_070 0.116202077 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
5 Hb_001366_230 0.119824972 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000313_380 0.1232659024 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000809_040 0.1258523369 - - Serine/threonine-protein kinase SAPK10, putative [Ricinus communis]
8 Hb_001366_220 0.126035295 - - conserved hypothetical protein [Ricinus communis]
9 Hb_026988_020 0.126611607 - - outward rectifying K+ channel [Hevea brasiliensis]
10 Hb_002392_040 0.1269975601 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009026_050 0.1280847419 - - vacuolar ATPase F subunit [Hevea brasiliensis]
12 Hb_006831_010 0.1294136401 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_005000_290 0.1331324234 transcription factor TF Family: HSF hypothetical protein JCGZ_07430 [Jatropha curcas]
14 Hb_008695_190 0.1334168945 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]
15 Hb_000304_020 0.1370773445 - - beta-1,3-glucanase form RRII Gln 3 [Hevea brasiliensis]
16 Hb_001584_300 0.1380650252 - - PREDICTED: pyroglutamyl-peptidase 1-like protein [Jatropha curcas]
17 Hb_000072_280 0.1433253434 - - PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2-like [Jatropha curcas]
18 Hb_183963_020 0.1450628714 - - PREDICTED: uncharacterized protein LOC105644615 [Jatropha curcas]
19 Hb_006787_040 0.1454633251 - - polyadenylate-binding protein, putative [Ricinus communis]
20 Hb_001191_100 0.1456172639 - - F-actin capping protein beta subunit [Populus trichocarpa]

Gene co-expression network

sample Hb_000614_070 Hb_000614_070 Hb_025087_010 Hb_025087_010 Hb_000614_070--Hb_025087_010 Hb_006132_060 Hb_006132_060 Hb_000614_070--Hb_006132_060 Hb_000787_070 Hb_000787_070 Hb_000614_070--Hb_000787_070 Hb_001366_230 Hb_001366_230 Hb_000614_070--Hb_001366_230 Hb_000313_380 Hb_000313_380 Hb_000614_070--Hb_000313_380 Hb_000809_040 Hb_000809_040 Hb_000614_070--Hb_000809_040 Hb_183963_020 Hb_183963_020 Hb_025087_010--Hb_183963_020 Hb_025087_010--Hb_001366_230 Hb_008695_190 Hb_008695_190 Hb_025087_010--Hb_008695_190 Hb_009026_050 Hb_009026_050 Hb_025087_010--Hb_009026_050 Hb_001722_040 Hb_001722_040 Hb_025087_010--Hb_001722_040 Hb_005000_290 Hb_005000_290 Hb_025087_010--Hb_005000_290 Hb_006132_060--Hb_000787_070 Hb_000345_030 Hb_000345_030 Hb_006132_060--Hb_000345_030 Hb_024505_040 Hb_024505_040 Hb_006132_060--Hb_024505_040 Hb_002387_060 Hb_002387_060 Hb_006132_060--Hb_002387_060 Hb_001584_300 Hb_001584_300 Hb_006132_060--Hb_001584_300 Hb_005016_130 Hb_005016_130 Hb_006132_060--Hb_005016_130 Hb_000787_070--Hb_005016_130 Hb_115919_020 Hb_115919_020 Hb_000787_070--Hb_115919_020 Hb_001102_010 Hb_001102_010 Hb_000787_070--Hb_001102_010 Hb_000787_070--Hb_024505_040 Hb_000078_030 Hb_000078_030 Hb_000787_070--Hb_000078_030 Hb_001191_100 Hb_001191_100 Hb_001366_230--Hb_001191_100 Hb_001366_230--Hb_183963_020 Hb_001366_230--Hb_000313_380 Hb_001804_040 Hb_001804_040 Hb_001366_230--Hb_001804_040 Hb_026988_020 Hb_026988_020 Hb_001366_230--Hb_026988_020 Hb_000313_380--Hb_000809_040 Hb_001366_220 Hb_001366_220 Hb_000313_380--Hb_001366_220 Hb_002662_100 Hb_002662_100 Hb_000313_380--Hb_002662_100 Hb_000313_380--Hb_009026_050 Hb_021068_050 Hb_021068_050 Hb_000313_380--Hb_021068_050 Hb_000809_040--Hb_001366_220 Hb_001981_090 Hb_001981_090 Hb_000809_040--Hb_001981_090 Hb_004882_020 Hb_004882_020 Hb_000809_040--Hb_004882_020 Hb_000085_310 Hb_000085_310 Hb_000809_040--Hb_000085_310 Hb_000771_140 Hb_000771_140 Hb_000809_040--Hb_000771_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.69127 0.136769 0 0.17752 0.819329 0.629041
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.16577 0.916014 0.946773 0.151208 0

CAGE analysis