Hb_000614_080

Information

Type -
Description -
Location Contig614: 66278-68948
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_080 0.0 - - -
2 Hb_027405_020 0.0958674788 - - PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Jatropha curcas]
3 Hb_000152_560 0.0971625232 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
4 Hb_000029_160 0.1070853317 - - Nitrilase, putative [Ricinus communis]
5 Hb_003125_060 0.1161433547 - - PREDICTED: snurportin-1 [Jatropha curcas]
6 Hb_000152_890 0.1190332758 - - hypothetical protein JCGZ_26265 [Jatropha curcas]
7 Hb_002813_010 0.1227951026 - - PREDICTED: uncharacterized protein LOC105641844 isoform X1 [Jatropha curcas]
8 Hb_000487_100 0.1240649848 - - PREDICTED: protein unc-45 homolog A [Jatropha curcas]
9 Hb_001057_010 0.124308427 - - cation-transporting atpase plant, putative [Ricinus communis]
10 Hb_002942_220 0.1271638654 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
11 Hb_001009_290 0.1280979075 - - PREDICTED: elongator complex protein 3-like [Populus euphratica]
12 Hb_002133_030 0.1317608198 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
13 Hb_005038_020 0.1320294876 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_000172_550 0.1325244792 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA1-like [Jatropha curcas]
15 Hb_017168_010 0.1326021379 - - conserved hypothetical protein [Ricinus communis]
16 Hb_012132_030 0.1327917808 - - PREDICTED: RNA polymerase-associated protein CTR9 homolog [Jatropha curcas]
17 Hb_043668_010 0.133380625 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_002078_420 0.1348404427 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
19 Hb_004162_280 0.1353986442 - - PREDICTED: uncharacterized protein LOC105628004 isoform X1 [Jatropha curcas]
20 Hb_000139_250 0.1368658767 - - PREDICTED: putative methyltransferase C9orf114 [Jatropha curcas]

Gene co-expression network

sample Hb_000614_080 Hb_000614_080 Hb_027405_020 Hb_027405_020 Hb_000614_080--Hb_027405_020 Hb_000152_560 Hb_000152_560 Hb_000614_080--Hb_000152_560 Hb_000029_160 Hb_000029_160 Hb_000614_080--Hb_000029_160 Hb_003125_060 Hb_003125_060 Hb_000614_080--Hb_003125_060 Hb_000152_890 Hb_000152_890 Hb_000614_080--Hb_000152_890 Hb_002813_010 Hb_002813_010 Hb_000614_080--Hb_002813_010 Hb_027405_020--Hb_003125_060 Hb_003020_110 Hb_003020_110 Hb_027405_020--Hb_003020_110 Hb_000310_080 Hb_000310_080 Hb_027405_020--Hb_000310_080 Hb_027405_020--Hb_000029_160 Hb_000172_550 Hb_000172_550 Hb_027405_020--Hb_000172_550 Hb_023020_060 Hb_023020_060 Hb_027405_020--Hb_023020_060 Hb_003097_190 Hb_003097_190 Hb_000152_560--Hb_003097_190 Hb_000152_560--Hb_000152_890 Hb_010068_030 Hb_010068_030 Hb_000152_560--Hb_010068_030 Hb_029866_130 Hb_029866_130 Hb_000152_560--Hb_029866_130 Hb_001057_010 Hb_001057_010 Hb_000152_560--Hb_001057_010 Hb_002960_060 Hb_002960_060 Hb_000029_160--Hb_002960_060 Hb_000029_160--Hb_000172_550 Hb_001975_070 Hb_001975_070 Hb_000029_160--Hb_001975_070 Hb_002078_420 Hb_002078_420 Hb_000029_160--Hb_002078_420 Hb_000029_160--Hb_000310_080 Hb_002133_030 Hb_002133_030 Hb_003125_060--Hb_002133_030 Hb_000685_080 Hb_000685_080 Hb_003125_060--Hb_000685_080 Hb_000487_100 Hb_000487_100 Hb_003125_060--Hb_000487_100 Hb_003125_060--Hb_023020_060 Hb_007305_010 Hb_007305_010 Hb_003125_060--Hb_007305_010 Hb_000367_290 Hb_000367_290 Hb_000152_890--Hb_000367_290 Hb_004032_350 Hb_004032_350 Hb_000152_890--Hb_004032_350 Hb_004724_360 Hb_004724_360 Hb_000152_890--Hb_004724_360 Hb_000001_180 Hb_000001_180 Hb_000152_890--Hb_000001_180 Hb_005314_010 Hb_005314_010 Hb_000152_890--Hb_005314_010 Hb_000152_890--Hb_002133_030 Hb_005946_170 Hb_005946_170 Hb_002813_010--Hb_005946_170 Hb_001080_270 Hb_001080_270 Hb_002813_010--Hb_001080_270 Hb_000421_120 Hb_000421_120 Hb_002813_010--Hb_000421_120 Hb_000865_080 Hb_000865_080 Hb_002813_010--Hb_000865_080 Hb_002524_040 Hb_002524_040 Hb_002813_010--Hb_002524_040 Hb_004162_280 Hb_004162_280 Hb_002813_010--Hb_004162_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.336556 0.240441 0.0291904 0.0517237 0.453833 0.185023
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.119155 0.11718 0.132298 0.112195 0.0491118

CAGE analysis