Hb_000614_120

Information

Type -
Description -
Location Contig614: 80098-80847
Sequence    

Annotation

kegg
ID rcu:RCOM_1081900
description transcription regulator, putative
nr
ID KDP26765.1
description hypothetical protein JCGZ_17923 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K3F0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17923 PE=4 SV=1
Gene Ontology
ID GO:0016021
description dna-binding storekeeper

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_120 0.0 - - hypothetical protein JCGZ_17923 [Jatropha curcas]
2 Hb_000120_560 0.0806344253 - - protein with unknown function [Ricinus communis]
3 Hb_007919_010 0.0884541604 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000098_230 0.0939836469 - - Potassium channel AKT2/3, putative [Ricinus communis]
5 Hb_006351_050 0.094380595 - - PREDICTED: uncharacterized protein LOC105133646 [Populus euphratica]
6 Hb_008021_050 0.0950793934 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000497_080 0.0987196206 - - conserved hypothetical protein [Ricinus communis]
8 Hb_180088_010 0.1029639099 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_001500_020 0.1066272123 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_001417_090 0.1082293538 - - PREDICTED: uncharacterized protein LOC105650625 [Jatropha curcas]
11 Hb_003607_080 0.1090376644 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
12 Hb_001541_170 0.1115290103 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
13 Hb_084304_010 0.1120740948 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
14 Hb_001418_050 0.1128664021 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
15 Hb_003427_070 0.1130803803 - - hypothetical protein POPTR_0067s00310g [Populus trichocarpa]
16 Hb_120040_010 0.1154337353 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
17 Hb_000175_370 0.118081396 - - hypothetical protein EUGRSUZ_F03862 [Eucalyptus grandis]
18 Hb_002260_140 0.1192482525 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000646_040 0.1201265713 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74-like [Jatropha curcas]
20 Hb_009079_020 0.1253936038 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000614_120 Hb_000614_120 Hb_000120_560 Hb_000120_560 Hb_000614_120--Hb_000120_560 Hb_007919_010 Hb_007919_010 Hb_000614_120--Hb_007919_010 Hb_000098_230 Hb_000098_230 Hb_000614_120--Hb_000098_230 Hb_006351_050 Hb_006351_050 Hb_000614_120--Hb_006351_050 Hb_008021_050 Hb_008021_050 Hb_000614_120--Hb_008021_050 Hb_000497_080 Hb_000497_080 Hb_000614_120--Hb_000497_080 Hb_000646_040 Hb_000646_040 Hb_000120_560--Hb_000646_040 Hb_003023_030 Hb_003023_030 Hb_000120_560--Hb_003023_030 Hb_000175_370 Hb_000175_370 Hb_000120_560--Hb_000175_370 Hb_000139_390 Hb_000139_390 Hb_000120_560--Hb_000139_390 Hb_002186_170 Hb_002186_170 Hb_000120_560--Hb_002186_170 Hb_180088_010 Hb_180088_010 Hb_007919_010--Hb_180088_010 Hb_007919_010--Hb_000098_230 Hb_007919_010--Hb_006351_050 Hb_000422_060 Hb_000422_060 Hb_007919_010--Hb_000422_060 Hb_001500_020 Hb_001500_020 Hb_007919_010--Hb_001500_020 Hb_001579_160 Hb_001579_160 Hb_007919_010--Hb_001579_160 Hb_001541_170 Hb_001541_170 Hb_000098_230--Hb_001541_170 Hb_003582_030 Hb_003582_030 Hb_000098_230--Hb_003582_030 Hb_001418_050 Hb_001418_050 Hb_000098_230--Hb_001418_050 Hb_000098_230--Hb_000422_060 Hb_007441_100 Hb_007441_100 Hb_000098_230--Hb_007441_100 Hb_006351_050--Hb_001500_020 Hb_006351_050--Hb_180088_010 Hb_003598_050 Hb_003598_050 Hb_006351_050--Hb_003598_050 Hb_006351_050--Hb_000497_080 Hb_112950_010 Hb_112950_010 Hb_006351_050--Hb_112950_010 Hb_003607_080 Hb_003607_080 Hb_008021_050--Hb_003607_080 Hb_003466_010 Hb_003466_010 Hb_008021_050--Hb_003466_010 Hb_000093_010 Hb_000093_010 Hb_008021_050--Hb_000093_010 Hb_001688_030 Hb_001688_030 Hb_008021_050--Hb_001688_030 Hb_120040_010 Hb_120040_010 Hb_008021_050--Hb_120040_010 Hb_008021_050--Hb_007919_010 Hb_000497_080--Hb_003598_050 Hb_003197_050 Hb_003197_050 Hb_000497_080--Hb_003197_050 Hb_000497_080--Hb_180088_010 Hb_000497_080--Hb_001500_020 Hb_017061_010 Hb_017061_010 Hb_000497_080--Hb_017061_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.274402 0.296369 1.68896 0 0.0282744
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0469479 0.230713

CAGE analysis