Hb_000614_180

Information

Type -
Description -
Location Contig614: 105691-106950
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_180 0.0 - - -
2 Hb_005000_310 0.1287947232 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
3 Hb_002475_070 0.1332152035 - - hypothetical protein POPTR_0017s02440g, partial [Populus trichocarpa]
4 Hb_148435_010 0.135041849 - - glutathione s-transferase, putative [Ricinus communis]
5 Hb_000297_180 0.1361321019 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
6 Hb_002521_010 0.1381335379 - - cinnamate 4-hydroxylase, putative [Ricinus communis]
7 Hb_000347_530 0.1383837633 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
8 Hb_001189_030 0.1498745044 - - hypothetical protein RCOM_1341480 [Ricinus communis]
9 Hb_000934_170 0.154810347 - - alcohol dehydrogenase, putative [Ricinus communis]
10 Hb_080225_010 0.155108325 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
11 Hb_028008_010 0.1553744384 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
12 Hb_144783_010 0.156492741 - - glutathione s-transferase, putative [Ricinus communis]
13 Hb_035583_010 0.1575706551 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
14 Hb_012368_080 0.158181068 - - PREDICTED: uncharacterized protein LOC105126277 [Populus euphratica]
15 Hb_000200_180 0.1588783647 - - -
16 Hb_000513_100 0.1623374838 - - germin-like protein GLP, partial [Manihot esculenta]
17 Hb_153457_010 0.1645727362 - - Miraculin precursor, putative [Ricinus communis]
18 Hb_002747_010 0.1648919896 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
19 Hb_007897_040 0.1651004583 - - ATP binding protein, putative [Ricinus communis]
20 Hb_002966_030 0.1664004879 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000614_180 Hb_000614_180 Hb_005000_310 Hb_005000_310 Hb_000614_180--Hb_005000_310 Hb_002475_070 Hb_002475_070 Hb_000614_180--Hb_002475_070 Hb_148435_010 Hb_148435_010 Hb_000614_180--Hb_148435_010 Hb_000297_180 Hb_000297_180 Hb_000614_180--Hb_000297_180 Hb_002521_010 Hb_002521_010 Hb_000614_180--Hb_002521_010 Hb_000347_530 Hb_000347_530 Hb_000614_180--Hb_000347_530 Hb_000019_220 Hb_000019_220 Hb_005000_310--Hb_000019_220 Hb_001366_250 Hb_001366_250 Hb_005000_310--Hb_001366_250 Hb_000045_230 Hb_000045_230 Hb_005000_310--Hb_000045_230 Hb_002311_240 Hb_002311_240 Hb_005000_310--Hb_002311_240 Hb_003057_080 Hb_003057_080 Hb_005000_310--Hb_003057_080 Hb_144783_010 Hb_144783_010 Hb_002475_070--Hb_144783_010 Hb_003893_100 Hb_003893_100 Hb_002475_070--Hb_003893_100 Hb_002475_070--Hb_000297_180 Hb_004316_130 Hb_004316_130 Hb_002475_070--Hb_004316_130 Hb_000797_030 Hb_000797_030 Hb_002475_070--Hb_000797_030 Hb_002475_070--Hb_002521_010 Hb_004195_240 Hb_004195_240 Hb_148435_010--Hb_004195_240 Hb_035583_010 Hb_035583_010 Hb_148435_010--Hb_035583_010 Hb_000347_550 Hb_000347_550 Hb_148435_010--Hb_000347_550 Hb_061195_010 Hb_061195_010 Hb_148435_010--Hb_061195_010 Hb_000748_070 Hb_000748_070 Hb_148435_010--Hb_000748_070 Hb_005000_040 Hb_005000_040 Hb_148435_010--Hb_005000_040 Hb_000297_180--Hb_003893_100 Hb_000297_180--Hb_004316_130 Hb_012368_080 Hb_012368_080 Hb_000297_180--Hb_012368_080 Hb_000297_180--Hb_144783_010 Hb_000297_180--Hb_035583_010 Hb_028008_010 Hb_028008_010 Hb_002521_010--Hb_028008_010 Hb_000200_180 Hb_000200_180 Hb_002521_010--Hb_000200_180 Hb_006153_190 Hb_006153_190 Hb_002521_010--Hb_006153_190 Hb_000021_090 Hb_000021_090 Hb_002521_010--Hb_000021_090 Hb_002521_010--Hb_144783_010 Hb_000513_100 Hb_000513_100 Hb_002521_010--Hb_000513_100 Hb_018591_010 Hb_018591_010 Hb_000347_530--Hb_018591_010 Hb_004544_070 Hb_004544_070 Hb_000347_530--Hb_004544_070 Hb_000934_170 Hb_000934_170 Hb_000347_530--Hb_000934_170 Hb_002301_420 Hb_002301_420 Hb_000347_530--Hb_002301_420 Hb_002749_070 Hb_002749_070 Hb_000347_530--Hb_002749_070 Hb_010407_120 Hb_010407_120 Hb_000347_530--Hb_010407_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.369778 1.65584 6.32923 0.02825 0.036863
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.415956 0.872151 0 32.7432 0.545984

CAGE analysis