Hb_000621_070

Information

Type -
Description -
Location Contig621: 77180-88727
Sequence    

Annotation

kegg
ID rcu:RCOM_1571060
description Monoglyceride lipase, putative (EC:3.1.1.23)
nr
ID XP_012077978.1
description PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
swissprot
ID Q9C942
description Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1
trembl
ID A0A067KA06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12983 PE=4 SV=1
Gene Ontology
ID GO:0009506
description caffeoylshikimate esterase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51511: 77030-79506 , PASA_asmbl_51512: 82598-88506
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000621_070 0.0 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
2 Hb_004837_270 0.0955251437 - - PREDICTED: cinnamoyl-CoA reductase 1 [Jatropha curcas]
3 Hb_001348_170 0.1052960673 - - PREDICTED: filament-like plant protein isoform X2 [Jatropha curcas]
4 Hb_002631_030 0.1102185012 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001629_080 0.1118794106 - - hypothetical protein POPTR_0011s12610g [Populus trichocarpa]
6 Hb_000174_210 0.1157357153 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
7 Hb_034482_020 0.1167258509 - - PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like [Jatropha curcas]
8 Hb_003922_010 0.1167387774 - - PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Jatropha curcas]
9 Hb_000815_070 0.1194032768 - - PREDICTED: methyltransferase-like protein 7A [Jatropha curcas]
10 Hb_001123_040 0.1198182956 - - PREDICTED: R3H domain-containing protein 1-like [Jatropha curcas]
11 Hb_010098_050 0.1219316113 - - PREDICTED: putative deoxyribonuclease tatdn3-A [Jatropha curcas]
12 Hb_000260_630 0.123000741 - - PREDICTED: altered inheritance rate of mitochondria protein 25 isoform X1 [Jatropha curcas]
13 Hb_089995_010 0.1230234728 - - PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like [Eucalyptus grandis]
14 Hb_000402_160 0.1230875246 - - PREDICTED: ribose-phosphate pyrophosphokinase 4 isoform X1 [Jatropha curcas]
15 Hb_002228_070 0.123517683 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
16 Hb_002028_150 0.1262653986 - - PREDICTED: hepatocyte growth factor-regulated tyrosine kinase substrate [Jatropha curcas]
17 Hb_000212_330 0.1270310729 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_005245_080 0.129616306 - - PREDICTED: uncharacterized protein LOC105643645 isoform X2 [Jatropha curcas]
19 Hb_002686_170 0.129641362 - - PREDICTED: uncharacterized protein LOC105632645 isoform X1 [Jatropha curcas]
20 Hb_004070_020 0.1296984211 - - rhythmically-expressed protein 2 protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000621_070 Hb_000621_070 Hb_004837_270 Hb_004837_270 Hb_000621_070--Hb_004837_270 Hb_001348_170 Hb_001348_170 Hb_000621_070--Hb_001348_170 Hb_002631_030 Hb_002631_030 Hb_000621_070--Hb_002631_030 Hb_001629_080 Hb_001629_080 Hb_000621_070--Hb_001629_080 Hb_000174_210 Hb_000174_210 Hb_000621_070--Hb_000174_210 Hb_034482_020 Hb_034482_020 Hb_000621_070--Hb_034482_020 Hb_004837_270--Hb_001348_170 Hb_002686_170 Hb_002686_170 Hb_004837_270--Hb_002686_170 Hb_004837_270--Hb_001629_080 Hb_000110_310 Hb_000110_310 Hb_004837_270--Hb_000110_310 Hb_001799_030 Hb_001799_030 Hb_004837_270--Hb_001799_030 Hb_000731_160 Hb_000731_160 Hb_004837_270--Hb_000731_160 Hb_001348_170--Hb_001629_080 Hb_001348_170--Hb_002686_170 Hb_000035_500 Hb_000035_500 Hb_001348_170--Hb_000035_500 Hb_004070_020 Hb_004070_020 Hb_001348_170--Hb_004070_020 Hb_000329_760 Hb_000329_760 Hb_002631_030--Hb_000329_760 Hb_001946_290 Hb_001946_290 Hb_002631_030--Hb_001946_290 Hb_000137_090 Hb_000137_090 Hb_002631_030--Hb_000137_090 Hb_000460_030 Hb_000460_030 Hb_002631_030--Hb_000460_030 Hb_002006_030 Hb_002006_030 Hb_002631_030--Hb_002006_030 Hb_031340_050 Hb_031340_050 Hb_002631_030--Hb_031340_050 Hb_002600_090 Hb_002600_090 Hb_001629_080--Hb_002600_090 Hb_010368_010 Hb_010368_010 Hb_001629_080--Hb_010368_010 Hb_005588_080 Hb_005588_080 Hb_001629_080--Hb_005588_080 Hb_001629_080--Hb_002686_170 Hb_005054_210 Hb_005054_210 Hb_000174_210--Hb_005054_210 Hb_002014_020 Hb_002014_020 Hb_000174_210--Hb_002014_020 Hb_003622_040 Hb_003622_040 Hb_000174_210--Hb_003622_040 Hb_007894_170 Hb_007894_170 Hb_000174_210--Hb_007894_170 Hb_000665_050 Hb_000665_050 Hb_000174_210--Hb_000665_050 Hb_006420_080 Hb_006420_080 Hb_000174_210--Hb_006420_080 Hb_002028_150 Hb_002028_150 Hb_034482_020--Hb_002028_150 Hb_000976_430 Hb_000976_430 Hb_034482_020--Hb_000976_430 Hb_004116_140 Hb_004116_140 Hb_034482_020--Hb_004116_140 Hb_002374_100 Hb_002374_100 Hb_034482_020--Hb_002374_100 Hb_000815_070 Hb_000815_070 Hb_034482_020--Hb_000815_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.80737 2.44409 9.63527 3.88302 5.6826 4.5866
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.9121 6.94918 7.94764 7.65048 5.23603

CAGE analysis