Hb_000622_090

Information

Type -
Description -
Location Contig622: 111324-116690
Sequence    

Annotation

kegg
ID rcu:RCOM_0149870
description Grave disease carrier protein, putative
nr
ID XP_012083252.1
description PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
swissprot
ID O04619
description Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1
trembl
ID A0A067JX18
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14287 PE=3 SV=1
Gene Ontology
ID GO:0016021
description mitochondrial adenine nucleotide transporter adnt1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51552: 114813-116452 , PASA_asmbl_51553: 111444-116644 , PASA_asmbl_51554: 114978-115320
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000622_090 0.0 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
2 Hb_000120_680 0.0786102577 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
3 Hb_000240_090 0.0945005243 - - Rab5 [Hevea brasiliensis]
4 Hb_021409_160 0.0961853014 - - hypothetical protein POPTR_0001s11040g [Populus trichocarpa]
5 Hb_004994_100 0.0982881925 - - acyl-CoA thioesterase, putative [Ricinus communis]
6 Hb_000563_250 0.0995643262 - - PREDICTED: uncharacterized protein LOC105643472 [Jatropha curcas]
7 Hb_004126_070 0.1000046917 desease resistance Gene Name: CDC48_2 PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
8 Hb_004993_050 0.1004452777 - - -
9 Hb_000617_150 0.1010880237 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like [Jatropha curcas]
10 Hb_034299_050 0.1046803714 - - hypothetical protein CICLE_v10031248mg [Citrus clementina]
11 Hb_001059_030 0.105209154 - - PREDICTED: F-box protein At5g03100-like [Solanum lycopersicum]
12 Hb_000108_190 0.1064968723 - - PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial [Jatropha curcas]
13 Hb_001699_130 0.1071074913 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
14 Hb_012675_060 0.1081013392 - - hypothetical protein PRUPE_ppa007715mg [Prunus persica]
15 Hb_129204_030 0.1100141864 - - PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Jatropha curcas]
16 Hb_004586_320 0.111268703 - - PREDICTED: bet1-like protein At4g14600 [Jatropha curcas]
17 Hb_000175_060 0.1117551486 - - PREDICTED: uncharacterized protein LOC105634837 [Jatropha curcas]
18 Hb_002056_060 0.1119976394 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
19 Hb_000696_040 0.1122318707 - - protein phosphatase 2c, putative [Ricinus communis]
20 Hb_032803_010 0.1126530189 - - PREDICTED: glycosyltransferase-like At2g41451 [Jatropha curcas]

Gene co-expression network

sample Hb_000622_090 Hb_000622_090 Hb_000120_680 Hb_000120_680 Hb_000622_090--Hb_000120_680 Hb_000240_090 Hb_000240_090 Hb_000622_090--Hb_000240_090 Hb_021409_160 Hb_021409_160 Hb_000622_090--Hb_021409_160 Hb_004994_100 Hb_004994_100 Hb_000622_090--Hb_004994_100 Hb_000563_250 Hb_000563_250 Hb_000622_090--Hb_000563_250 Hb_004126_070 Hb_004126_070 Hb_000622_090--Hb_004126_070 Hb_000617_150 Hb_000617_150 Hb_000120_680--Hb_000617_150 Hb_000120_680--Hb_000240_090 Hb_004635_100 Hb_004635_100 Hb_000120_680--Hb_004635_100 Hb_000120_680--Hb_000563_250 Hb_001699_130 Hb_001699_130 Hb_000120_680--Hb_001699_130 Hb_000240_090--Hb_004635_100 Hb_129204_030 Hb_129204_030 Hb_000240_090--Hb_129204_030 Hb_000347_410 Hb_000347_410 Hb_000240_090--Hb_000347_410 Hb_029866_020 Hb_029866_020 Hb_000240_090--Hb_029866_020 Hb_021409_030 Hb_021409_030 Hb_000240_090--Hb_021409_030 Hb_021409_160--Hb_000563_250 Hb_002056_060 Hb_002056_060 Hb_021409_160--Hb_002056_060 Hb_021409_160--Hb_000120_680 Hb_000125_030 Hb_000125_030 Hb_021409_160--Hb_000125_030 Hb_021409_160--Hb_000240_090 Hb_000331_080 Hb_000331_080 Hb_004994_100--Hb_000331_080 Hb_153112_020 Hb_153112_020 Hb_004994_100--Hb_153112_020 Hb_002477_070 Hb_002477_070 Hb_004994_100--Hb_002477_070 Hb_001277_330 Hb_001277_330 Hb_004994_100--Hb_001277_330 Hb_034299_050 Hb_034299_050 Hb_004994_100--Hb_034299_050 Hb_026527_030 Hb_026527_030 Hb_004994_100--Hb_026527_030 Hb_001616_030 Hb_001616_030 Hb_000563_250--Hb_001616_030 Hb_000563_250--Hb_000240_090 Hb_000563_250--Hb_021409_030 Hb_000086_280 Hb_000086_280 Hb_000563_250--Hb_000086_280 Hb_000108_190 Hb_000108_190 Hb_004126_070--Hb_000108_190 Hb_000841_020 Hb_000841_020 Hb_004126_070--Hb_000841_020 Hb_001897_040 Hb_001897_040 Hb_004126_070--Hb_001897_040 Hb_000291_080 Hb_000291_080 Hb_004126_070--Hb_000291_080 Hb_032264_110 Hb_032264_110 Hb_004126_070--Hb_032264_110 Hb_001059_030 Hb_001059_030 Hb_004126_070--Hb_001059_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
37.8953 20.5896 15.559 27.5494 49.9317 17.9057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
59.8621 79.7927 85.9617 28.7594 23.7163

CAGE analysis