Hb_000627_060

Information

Type -
Description -
Location Contig627: 98324-100165
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID W5FVL4
description Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000627_060 0.0 - - -
2 Hb_002093_010 0.0153980024 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
3 Hb_007741_060 0.0160334731 - - PREDICTED: putative lipid-binding protein At4g00165 [Jatropha curcas]
4 Hb_006435_020 0.031109063 - - sugar transporter, putative [Ricinus communis]
5 Hb_002704_090 0.0318165297 - - cytochrome P450, putative [Ricinus communis]
6 Hb_004567_080 0.0421957785 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
7 Hb_004643_030 0.0422073072 - - conserved hypothetical protein [Ricinus communis]
8 Hb_177343_020 0.0438539179 - - PREDICTED: uncharacterized protein LOC104751876 [Camelina sativa]
9 Hb_002276_110 0.0479201189 - - protein binding protein, putative [Ricinus communis]
10 Hb_007933_010 0.0481897447 - - ATP-binding cassette transporter, putative [Ricinus communis]
11 Hb_059280_010 0.0494240147 - - hypothetical protein POPTR_0019s02860g [Populus trichocarpa]
12 Hb_035265_020 0.0507425334 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_007219_010 0.0536055521 - - -
14 Hb_003120_090 0.057212766 - - PREDICTED: uncharacterized protein LOC100264374 [Vitis vinifera]
15 Hb_000648_090 0.0576578134 - - -
16 Hb_000853_280 0.058456301 - - PREDICTED: extensin-like [Jatropha curcas]
17 Hb_002421_170 0.0640857661 - - hypothetical protein POPTR_0003s18240g [Populus trichocarpa]
18 Hb_005018_050 0.0677189663 - - PREDICTED: licodione synthase-like [Jatropha curcas]
19 Hb_031194_030 0.0692103901 - - ribulose 1,5-bisphosphate carboxylase/oxygenase [Stackhousia minima]
20 Hb_001511_040 0.0745348264 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_000627_060 Hb_000627_060 Hb_002093_010 Hb_002093_010 Hb_000627_060--Hb_002093_010 Hb_007741_060 Hb_007741_060 Hb_000627_060--Hb_007741_060 Hb_006435_020 Hb_006435_020 Hb_000627_060--Hb_006435_020 Hb_002704_090 Hb_002704_090 Hb_000627_060--Hb_002704_090 Hb_004567_080 Hb_004567_080 Hb_000627_060--Hb_004567_080 Hb_004643_030 Hb_004643_030 Hb_000627_060--Hb_004643_030 Hb_002093_010--Hb_002704_090 Hb_002093_010--Hb_007741_060 Hb_007933_010 Hb_007933_010 Hb_002093_010--Hb_007933_010 Hb_002093_010--Hb_006435_020 Hb_003120_090 Hb_003120_090 Hb_002093_010--Hb_003120_090 Hb_007741_060--Hb_006435_020 Hb_177343_020 Hb_177343_020 Hb_007741_060--Hb_177343_020 Hb_007741_060--Hb_004643_030 Hb_007741_060--Hb_004567_080 Hb_006435_020--Hb_002704_090 Hb_006435_020--Hb_004567_080 Hb_006435_020--Hb_004643_030 Hb_002704_090--Hb_003120_090 Hb_005018_050 Hb_005018_050 Hb_002704_090--Hb_005018_050 Hb_002704_090--Hb_007933_010 Hb_031194_030 Hb_031194_030 Hb_002704_090--Hb_031194_030 Hb_004567_080--Hb_004643_030 Hb_004567_080--Hb_177343_020 Hb_035265_020 Hb_035265_020 Hb_004567_080--Hb_035265_020 Hb_002276_110 Hb_002276_110 Hb_004567_080--Hb_002276_110 Hb_000648_090 Hb_000648_090 Hb_004567_080--Hb_000648_090 Hb_004643_030--Hb_177343_020 Hb_004643_030--Hb_035265_020 Hb_004643_030--Hb_002276_110 Hb_004643_030--Hb_000648_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.791001 0.0432882 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 11.7641

CAGE analysis