Hb_000627_120

Information

Type -
Description -
Location Contig627: 130253-132283
Sequence    

Annotation

kegg
ID rcu:RCOM_1678250
description adenylate kinase 1 chloroplast, putative (EC:2.7.4.3)
nr
ID XP_012070663.1
description PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
swissprot
ID Q8L7W7
description Probable adenylate kinase 7, mitochondrial OS=Arabidopsis thaliana GN=At3g01820 PE=2 SV=1
trembl
ID A0A067LD50
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10147 PE=3 SV=1
Gene Ontology
ID GO:0004017
description probable adenylate kinase mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51705: 130285-132325
cDNA
(Sanger)
(ID:Location)		 032_M13.ab1: 131326-132330

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000627_120 0.0 - - PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
2 Hb_002716_070 0.0850711362 - - PREDICTED: protein ABIL2 [Jatropha curcas]
3 Hb_003408_030 0.0864829722 - - PREDICTED: protein YIF1B [Jatropha curcas]
4 Hb_003376_120 0.0885563788 - - PREDICTED: cell number regulator 8 [Jatropha curcas]
5 Hb_000205_270 0.089421382 - - PREDICTED: uncharacterized protein LOC105632722 isoform X1 [Jatropha curcas]
6 Hb_044662_070 0.0905082947 - - PREDICTED: hsp70-Hsp90 organizing protein 3 [Jatropha curcas]
7 Hb_009486_130 0.0915005746 - - hypothetical protein CISIN_1g023046mg [Citrus sinensis]
8 Hb_023386_080 0.0928273137 - - PREDICTED: peroxisome biogenesis protein 19-2-like [Jatropha curcas]
9 Hb_153112_020 0.0933839174 - - PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Jatropha curcas]
10 Hb_000200_340 0.0938775375 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
11 Hb_055062_030 0.0939826935 - - PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like isoform X1 [Jatropha curcas]
12 Hb_006693_030 0.0944859736 - - PREDICTED: ribonuclease H2 subunit A [Jatropha curcas]
13 Hb_000009_160 0.0954784829 - - RUB1 conjugating enzyme 1 isoform 2 [Theobroma cacao]
14 Hb_000431_010 0.0966418247 - - hypothetical protein POPTR_0016s05340g [Populus trichocarpa]
15 Hb_003207_190 0.0967812799 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Populus euphratica]
16 Hb_002603_100 0.0972241786 - - ATATH9, putative [Ricinus communis]
17 Hb_000115_330 0.0986842171 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
18 Hb_000883_050 0.0989962242 - - PREDICTED: 60S ribosomal protein L37a-like, partial [Solanum tuberosum]
19 Hb_016065_010 0.0999576225 - - PREDICTED: pentatricopeptide repeat-containing protein At5g08305 [Jatropha curcas]
20 Hb_004899_320 0.1007864227 - - PREDICTED: oligouridylate-binding protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000627_120 Hb_000627_120 Hb_002716_070 Hb_002716_070 Hb_000627_120--Hb_002716_070 Hb_003408_030 Hb_003408_030 Hb_000627_120--Hb_003408_030 Hb_003376_120 Hb_003376_120 Hb_000627_120--Hb_003376_120 Hb_000205_270 Hb_000205_270 Hb_000627_120--Hb_000205_270 Hb_044662_070 Hb_044662_070 Hb_000627_120--Hb_044662_070 Hb_009486_130 Hb_009486_130 Hb_000627_120--Hb_009486_130 Hb_000170_010 Hb_000170_010 Hb_002716_070--Hb_000170_010 Hb_003175_040 Hb_003175_040 Hb_002716_070--Hb_003175_040 Hb_004837_140 Hb_004837_140 Hb_002716_070--Hb_004837_140 Hb_002028_130 Hb_002028_130 Hb_002716_070--Hb_002028_130 Hb_001718_100 Hb_001718_100 Hb_002716_070--Hb_001718_100 Hb_002716_070--Hb_000205_270 Hb_000753_130 Hb_000753_130 Hb_003408_030--Hb_000753_130 Hb_003408_030--Hb_003376_120 Hb_000861_040 Hb_000861_040 Hb_003408_030--Hb_000861_040 Hb_002527_070 Hb_002527_070 Hb_003408_030--Hb_002527_070 Hb_007924_020 Hb_007924_020 Hb_003408_030--Hb_007924_020 Hb_000634_100 Hb_000634_100 Hb_003376_120--Hb_000634_100 Hb_023386_080 Hb_023386_080 Hb_003376_120--Hb_023386_080 Hb_003376_120--Hb_044662_070 Hb_003376_120--Hb_007924_020 Hb_016065_010 Hb_016065_010 Hb_000205_270--Hb_016065_010 Hb_000009_160 Hb_000009_160 Hb_000205_270--Hb_000009_160 Hb_001109_020 Hb_001109_020 Hb_000205_270--Hb_001109_020 Hb_005488_010 Hb_005488_010 Hb_000205_270--Hb_005488_010 Hb_000329_310 Hb_000329_310 Hb_000205_270--Hb_000329_310 Hb_000444_050 Hb_000444_050 Hb_000205_270--Hb_000444_050 Hb_044662_070--Hb_023386_080 Hb_004108_230 Hb_004108_230 Hb_044662_070--Hb_004108_230 Hb_044662_070--Hb_007924_020 Hb_044662_070--Hb_003175_040 Hb_003408_020 Hb_003408_020 Hb_044662_070--Hb_003408_020 Hb_000115_330 Hb_000115_330 Hb_009486_130--Hb_000115_330 Hb_009486_130--Hb_016065_010 Hb_000431_010 Hb_000431_010 Hb_009486_130--Hb_000431_010 Hb_008300_010 Hb_008300_010 Hb_009486_130--Hb_008300_010 Hb_009486_130--Hb_000205_270 Hb_009486_130--Hb_005488_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
112.961 40.4971 75.6419 46.6301 164.798 165.647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
239.344 229.783 297.716 60.7908 43.2772

CAGE analysis