Hb_000631_090

Information

Type -
Description -
Location Contig631: 88486-102761
Sequence    

Annotation

kegg
ID cit:102617084
description uncharacterized LOC102617084
nr
ID XP_012080373.1
description PREDICTED: uncharacterized protein LOC105640619 [Jatropha curcas]
swissprot
ID P0C2F6
description Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1
trembl
ID A0A067K539
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11717 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51822: 93250-97899 , PASA_asmbl_51823: 94235-94579 , PASA_asmbl_51825: 100054-103030 , PASA_asmbl_51826: 100054-102067
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000631_090 0.0 - - PREDICTED: uncharacterized protein LOC105640619 [Jatropha curcas]
2 Hb_000045_160 0.1049845829 - - PREDICTED: glycosyltransferase family 64 protein C4 [Jatropha curcas]
3 Hb_054865_020 0.1051097929 transcription factor TF Family: HB homeobox leucine zipper family protein [Populus trichocarpa]
4 Hb_000470_110 0.1101650184 - - PREDICTED: probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 [Jatropha curcas]
5 Hb_011930_100 0.1181087515 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
6 Hb_002307_080 0.1202429259 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000803_090 0.122145785 - - PREDICTED: transcription initiation factor IIB isoform X1 [Jatropha curcas]
8 Hb_004718_060 0.1285129167 - - PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X1 [Jatropha curcas]
9 Hb_000640_190 0.128980882 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
10 Hb_012753_210 0.1295528326 - - PREDICTED: inactive rhomboid protein 1-like [Jatropha curcas]
11 Hb_001621_110 0.1332978534 - - PREDICTED: uncharacterized protein LOC105647362 [Jatropha curcas]
12 Hb_007777_010 0.1356509844 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Tarenaya hassleriana]
13 Hb_114943_020 0.1358965346 - - PREDICTED: NADPH--cytochrome P450 reductase 2 [Jatropha curcas]
14 Hb_002026_090 0.1368719068 - - PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Jatropha curcas]
15 Hb_020805_100 0.1385240201 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
16 Hb_001247_210 0.1391217893 - - conserved hypothetical protein [Ricinus communis]
17 Hb_027380_210 0.1394359811 - - PREDICTED: uncharacterized protein LOC105634030 [Jatropha curcas]
18 Hb_005873_020 0.1403293628 - - PREDICTED: ATP-dependent zinc metalloprotease FtsH [Jatropha curcas]
19 Hb_000015_150 0.141170899 - - Ubiquitin-conjugating enzyme E2 7 family protein [Populus trichocarpa]
20 Hb_012305_140 0.1417613302 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000631_090 Hb_000631_090 Hb_000045_160 Hb_000045_160 Hb_000631_090--Hb_000045_160 Hb_054865_020 Hb_054865_020 Hb_000631_090--Hb_054865_020 Hb_000470_110 Hb_000470_110 Hb_000631_090--Hb_000470_110 Hb_011930_100 Hb_011930_100 Hb_000631_090--Hb_011930_100 Hb_002307_080 Hb_002307_080 Hb_000631_090--Hb_002307_080 Hb_000803_090 Hb_000803_090 Hb_000631_090--Hb_000803_090 Hb_000640_190 Hb_000640_190 Hb_000045_160--Hb_000640_190 Hb_000045_160--Hb_011930_100 Hb_033152_090 Hb_033152_090 Hb_000045_160--Hb_033152_090 Hb_088584_010 Hb_088584_010 Hb_000045_160--Hb_088584_010 Hb_002249_020 Hb_002249_020 Hb_000045_160--Hb_002249_020 Hb_000815_310 Hb_000815_310 Hb_000045_160--Hb_000815_310 Hb_005873_020 Hb_005873_020 Hb_054865_020--Hb_005873_020 Hb_004116_160 Hb_004116_160 Hb_054865_020--Hb_004116_160 Hb_052128_010 Hb_052128_010 Hb_054865_020--Hb_052128_010 Hb_004718_060 Hb_004718_060 Hb_054865_020--Hb_004718_060 Hb_000098_240 Hb_000098_240 Hb_054865_020--Hb_000098_240 Hb_002809_160 Hb_002809_160 Hb_000470_110--Hb_002809_160 Hb_000470_110--Hb_004718_060 Hb_001878_060 Hb_001878_060 Hb_000470_110--Hb_001878_060 Hb_011457_140 Hb_011457_140 Hb_000470_110--Hb_011457_140 Hb_000470_110--Hb_054865_020 Hb_011930_100--Hb_000815_310 Hb_003777_130 Hb_003777_130 Hb_011930_100--Hb_003777_130 Hb_011930_100--Hb_000640_190 Hb_001396_070 Hb_001396_070 Hb_011930_100--Hb_001396_070 Hb_011930_100--Hb_033152_090 Hb_006022_010 Hb_006022_010 Hb_002307_080--Hb_006022_010 Hb_002307_080--Hb_054865_020 Hb_002307_080--Hb_052128_010 Hb_002307_080--Hb_000045_160 Hb_002307_080--Hb_002249_020 Hb_011609_010 Hb_011609_010 Hb_000803_090--Hb_011609_010 Hb_003747_050 Hb_003747_050 Hb_000803_090--Hb_003747_050 Hb_000008_390 Hb_000008_390 Hb_000803_090--Hb_000008_390 Hb_001624_040 Hb_001624_040 Hb_000803_090--Hb_001624_040 Hb_002301_210 Hb_002301_210 Hb_000803_090--Hb_002301_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.26126 7.6475 10.3428 6.17754 1.78613 4.58495
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.74207 0.681269 1.11589 2.19142 4.40759

CAGE analysis