Hb_000631_100

Information

Type -
Description -
Location Contig631: 108863-114613
Sequence    

Annotation

kegg
ID rcu:RCOM_1469900
description hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID XP_012080369.1
description PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Jatropha curcas]
swissprot
ID Q9FZ86
description PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1
trembl
ID A0A067K5E2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11713 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51828: 108730-114583
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000631_100 0.0 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Jatropha curcas]
2 Hb_000411_020 0.0743057493 - - cytochrome P450, putative [Ricinus communis]
3 Hb_189208_050 0.0770260419 - - PREDICTED: uncharacterized protein LOC105642694 isoform X2 [Jatropha curcas]
4 Hb_024868_010 0.0846882796 - - protein kinase, putative [Ricinus communis]
5 Hb_087427_010 0.0901586188 - - hypothetical protein PRUPE_ppa007748mg [Prunus persica]
6 Hb_002641_140 0.0904204466 - - protein phosphatase 2c, putative [Ricinus communis]
7 Hb_008021_040 0.0967205138 - - PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
8 Hb_003216_140 0.0970268962 - - F-box protein SNE, putative [Ricinus communis]
9 Hb_006916_120 0.0992008317 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
10 Hb_004659_100 0.1024223845 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002888_100 0.1053286119 - - PREDICTED: uncharacterized protein LOC103699074, partial [Phoenix dactylifera]
12 Hb_009627_020 0.1073764683 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
13 Hb_005357_120 0.1093761326 transcription factor TF Family: MYB-related -
14 Hb_000975_090 0.1114706347 - - Zeamatin precursor, putative [Ricinus communis]
15 Hb_001562_030 0.11228399 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
16 Hb_033053_020 0.1137818109 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
17 Hb_000111_120 0.1153728197 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
18 Hb_000098_260 0.1161462544 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
19 Hb_004631_100 0.1168383451 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
20 Hb_003875_040 0.1182653632 - - PREDICTED: endoglucanase 11-like [Jatropha curcas]

Gene co-expression network

sample Hb_000631_100 Hb_000631_100 Hb_000411_020 Hb_000411_020 Hb_000631_100--Hb_000411_020 Hb_189208_050 Hb_189208_050 Hb_000631_100--Hb_189208_050 Hb_024868_010 Hb_024868_010 Hb_000631_100--Hb_024868_010 Hb_087427_010 Hb_087427_010 Hb_000631_100--Hb_087427_010 Hb_002641_140 Hb_002641_140 Hb_000631_100--Hb_002641_140 Hb_008021_040 Hb_008021_040 Hb_000631_100--Hb_008021_040 Hb_000411_020--Hb_189208_050 Hb_000411_020--Hb_002641_140 Hb_000098_260 Hb_000098_260 Hb_000411_020--Hb_000098_260 Hb_003216_140 Hb_003216_140 Hb_000411_020--Hb_003216_140 Hb_005357_120 Hb_005357_120 Hb_000411_020--Hb_005357_120 Hb_189208_050--Hb_003216_140 Hb_189208_050--Hb_002641_140 Hb_001247_090 Hb_001247_090 Hb_189208_050--Hb_001247_090 Hb_189208_050--Hb_024868_010 Hb_009838_120 Hb_009838_120 Hb_024868_010--Hb_009838_120 Hb_001645_030 Hb_001645_030 Hb_024868_010--Hb_001645_030 Hb_009627_020 Hb_009627_020 Hb_024868_010--Hb_009627_020 Hb_024868_010--Hb_003216_140 Hb_033053_020 Hb_033053_020 Hb_087427_010--Hb_033053_020 Hb_087427_010--Hb_189208_050 Hb_087427_010--Hb_008021_040 Hb_087427_010--Hb_024868_010 Hb_006916_120 Hb_006916_120 Hb_087427_010--Hb_006916_120 Hb_002641_140--Hb_008021_040 Hb_002641_140--Hb_000098_260 Hb_002641_140--Hb_005357_120 Hb_012787_060 Hb_012787_060 Hb_002641_140--Hb_012787_060 Hb_139461_010 Hb_139461_010 Hb_008021_040--Hb_139461_010 Hb_008021_040--Hb_189208_050 Hb_008021_040--Hb_024868_010 Hb_001048_070 Hb_001048_070 Hb_008021_040--Hb_001048_070 Hb_029142_040 Hb_029142_040 Hb_008021_040--Hb_029142_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.692964 50.0305 84.1099 138.54 0.982445 0.4395
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.185167 55.9586 17.919

CAGE analysis