Hb_000634_070

Information

Type -
Description -
Location Contig634: 86486-91796
Sequence    

Annotation

kegg
ID pop:POPTR_0003s03310g
description kinase family protein
nr
ID XP_012075363.1
description PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
swissprot
ID Q9LTC0
description Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1
trembl
ID A0A067LFG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11891 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at5g47070

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51875: 86422-91778 , PASA_asmbl_51876: 90848-91003
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000634_070 0.0 - - PREDICTED: probable receptor-like protein kinase At5g47070 [Jatropha curcas]
2 Hb_003078_050 0.0879540119 - - PREDICTED: serine/threonine-protein kinase OXI1 [Jatropha curcas]
3 Hb_003097_100 0.101944546 - - probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Jatropha curcas]
4 Hb_000069_230 0.1264171816 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH13-like [Jatropha curcas]
5 Hb_000953_050 0.1348681707 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
6 Hb_001205_030 0.1414378776 transcription factor TF Family: zf-HD hypothetical protein POPTR_0007s12970g [Populus trichocarpa]
7 Hb_028207_040 0.1428273355 - - PREDICTED: beta-hexosaminidase 2 [Jatropha curcas]
8 Hb_002026_060 0.144524843 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
9 Hb_010921_030 0.1449449048 transcription factor TF Family: PHD PREDICTED: PHD finger protein At2g01810 [Jatropha curcas]
10 Hb_005496_180 0.1460933909 - - PREDICTED: U-box domain-containing protein 4-like [Jatropha curcas]
11 Hb_002097_200 0.1478359363 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
12 Hb_001525_010 0.1492644826 - - PREDICTED: uncharacterized protein LOC105638298 [Jatropha curcas]
13 Hb_001268_390 0.1497179001 - - PREDICTED: uncharacterized protein LOC105108367 isoform X1 [Populus euphratica]
14 Hb_000179_240 0.1506417124 - - PREDICTED: threonine synthase 1, chloroplastic [Jatropha curcas]
15 Hb_001369_570 0.1510211332 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
16 Hb_003605_240 0.1510638409 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
17 Hb_000987_060 0.151158067 - - PREDICTED: BRCA1-A complex subunit Abraxas [Jatropha curcas]
18 Hb_000258_380 0.1523344484 - - PREDICTED: F-box/kelch-repeat protein SKIP11-like [Jatropha curcas]
19 Hb_002572_050 0.152484826 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
20 Hb_006788_140 0.1548231804 - - PREDICTED: uncharacterized protein LOC105649915 [Jatropha curcas]

Gene co-expression network

sample Hb_000634_070 Hb_000634_070 Hb_003078_050 Hb_003078_050 Hb_000634_070--Hb_003078_050 Hb_003097_100 Hb_003097_100 Hb_000634_070--Hb_003097_100 Hb_000069_230 Hb_000069_230 Hb_000634_070--Hb_000069_230 Hb_000953_050 Hb_000953_050 Hb_000634_070--Hb_000953_050 Hb_001205_030 Hb_001205_030 Hb_000634_070--Hb_001205_030 Hb_028207_040 Hb_028207_040 Hb_000634_070--Hb_028207_040 Hb_003078_050--Hb_000069_230 Hb_003078_050--Hb_028207_040 Hb_003078_050--Hb_003097_100 Hb_000258_380 Hb_000258_380 Hb_003078_050--Hb_000258_380 Hb_003078_050--Hb_001205_030 Hb_003097_100--Hb_000069_230 Hb_003097_100--Hb_028207_040 Hb_022693_050 Hb_022693_050 Hb_003097_100--Hb_022693_050 Hb_003728_040 Hb_003728_040 Hb_003097_100--Hb_003728_040 Hb_000069_230--Hb_028207_040 Hb_004597_010 Hb_004597_010 Hb_000069_230--Hb_004597_010 Hb_001525_010 Hb_001525_010 Hb_000069_230--Hb_001525_010 Hb_000953_050--Hb_028207_040 Hb_005496_180 Hb_005496_180 Hb_000953_050--Hb_005496_180 Hb_003055_140 Hb_003055_140 Hb_000953_050--Hb_003055_140 Hb_002572_050 Hb_002572_050 Hb_000953_050--Hb_002572_050 Hb_009028_010 Hb_009028_010 Hb_000953_050--Hb_009028_010 Hb_001629_060 Hb_001629_060 Hb_000953_050--Hb_001629_060 Hb_010921_030 Hb_010921_030 Hb_001205_030--Hb_010921_030 Hb_000925_160 Hb_000925_160 Hb_001205_030--Hb_000925_160 Hb_000345_200 Hb_000345_200 Hb_001205_030--Hb_000345_200 Hb_126380_010 Hb_126380_010 Hb_001205_030--Hb_126380_010 Hb_189208_020 Hb_189208_020 Hb_001205_030--Hb_189208_020 Hb_028207_040--Hb_001525_010 Hb_003120_050 Hb_003120_050 Hb_028207_040--Hb_003120_050 Hb_001369_570 Hb_001369_570 Hb_028207_040--Hb_001369_570
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.6372 85.3495 17.0634 13.7716 8.96617 12.1096
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.9107 21.861 25.6105 13.5149 5.42477

CAGE analysis