Hb_000635_010

Information

Type -
Description -
Location Contig635: 370-1123
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000635_010 0.0 - - -
2 Hb_160837_010 0.1873909573 - - -
3 Hb_145084_010 0.2193771671 - - PREDICTED: uncharacterized protein LOC105646270 [Jatropha curcas]
4 Hb_000270_620 0.2327273136 - - PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas]
5 Hb_002151_050 0.2341614972 - - cytochrome P450, putative [Ricinus communis]
6 Hb_012239_100 0.2389402124 - - hypothetical protein VITISV_043897 [Vitis vinifera]
7 Hb_000098_220 0.2500909456 - - PREDICTED: VQ motif-containing protein 4 [Jatropha curcas]
8 Hb_030370_030 0.2503845258 - - putative wall-associated kinase family protein [Populus trichocarpa]
9 Hb_002046_170 0.2529259179 - - PREDICTED: petal death protein [Eucalyptus grandis]
10 Hb_004333_030 0.257739695 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Jatropha curcas]
11 Hb_006351_110 0.2592133719 - - -
12 Hb_010594_030 0.2606532743 - - -
13 Hb_000059_350 0.2610865617 - - glutamate dehydrogenase, putative [Ricinus communis]
14 Hb_003043_120 0.2625779859 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007218_100 0.2632257913 - - phosphofructokinase [Hevea brasiliensis]
16 Hb_000954_020 0.2633338017 - - -
17 Hb_002609_060 0.2635309382 - - PREDICTED: sugar transport protein 8-like [Jatropha curcas]
18 Hb_001102_250 0.264634854 - - PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Jatropha curcas]
19 Hb_010827_020 0.2647745155 - - 60S ribosomal protein L17B [Hevea brasiliensis]
20 Hb_000227_130 0.2663150832 - - PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000635_010 Hb_000635_010 Hb_160837_010 Hb_160837_010 Hb_000635_010--Hb_160837_010 Hb_145084_010 Hb_145084_010 Hb_000635_010--Hb_145084_010 Hb_000270_620 Hb_000270_620 Hb_000635_010--Hb_000270_620 Hb_002151_050 Hb_002151_050 Hb_000635_010--Hb_002151_050 Hb_012239_100 Hb_012239_100 Hb_000635_010--Hb_012239_100 Hb_000098_220 Hb_000098_220 Hb_000635_010--Hb_000098_220 Hb_030370_030 Hb_030370_030 Hb_160837_010--Hb_030370_030 Hb_178968_160 Hb_178968_160 Hb_160837_010--Hb_178968_160 Hb_003043_120 Hb_003043_120 Hb_160837_010--Hb_003043_120 Hb_000144_110 Hb_000144_110 Hb_160837_010--Hb_000144_110 Hb_002007_050 Hb_002007_050 Hb_160837_010--Hb_002007_050 Hb_002609_060 Hb_002609_060 Hb_145084_010--Hb_002609_060 Hb_000363_200 Hb_000363_200 Hb_145084_010--Hb_000363_200 Hb_000907_170 Hb_000907_170 Hb_145084_010--Hb_000907_170 Hb_001863_090 Hb_001863_090 Hb_145084_010--Hb_001863_090 Hb_003097_210 Hb_003097_210 Hb_145084_010--Hb_003097_210 Hb_001016_090 Hb_001016_090 Hb_145084_010--Hb_001016_090 Hb_000103_550 Hb_000103_550 Hb_000270_620--Hb_000103_550 Hb_000123_160 Hb_000123_160 Hb_000270_620--Hb_000123_160 Hb_000318_490 Hb_000318_490 Hb_000270_620--Hb_000318_490 Hb_004159_050 Hb_004159_050 Hb_000270_620--Hb_004159_050 Hb_000920_320 Hb_000920_320 Hb_000270_620--Hb_000920_320 Hb_004545_130 Hb_004545_130 Hb_000270_620--Hb_004545_130 Hb_003913_080 Hb_003913_080 Hb_002151_050--Hb_003913_080 Hb_002151_050--Hb_012239_100 Hb_002138_010 Hb_002138_010 Hb_002151_050--Hb_002138_010 Hb_036790_020 Hb_036790_020 Hb_002151_050--Hb_036790_020 Hb_000184_230 Hb_000184_230 Hb_002151_050--Hb_000184_230 Hb_002151_050--Hb_145084_010 Hb_009838_040 Hb_009838_040 Hb_012239_100--Hb_009838_040 Hb_000215_180 Hb_000215_180 Hb_012239_100--Hb_000215_180 Hb_005000_160 Hb_005000_160 Hb_012239_100--Hb_005000_160 Hb_001579_140 Hb_001579_140 Hb_012239_100--Hb_001579_140 Hb_000432_050 Hb_000432_050 Hb_012239_100--Hb_000432_050 Hb_001538_140 Hb_001538_140 Hb_012239_100--Hb_001538_140 Hb_002943_030 Hb_002943_030 Hb_000098_220--Hb_002943_030 Hb_001623_430 Hb_001623_430 Hb_000098_220--Hb_001623_430 Hb_004650_100 Hb_004650_100 Hb_000098_220--Hb_004650_100 Hb_075653_020 Hb_075653_020 Hb_000098_220--Hb_075653_020 Hb_000106_100 Hb_000106_100 Hb_000098_220--Hb_000106_100 Hb_000098_220--Hb_002609_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.077116 0 0.0603047 0 0 0.102799
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.267731 0.491046 0.248252 0.229081 0

CAGE analysis