Hb_000635_130

Information

Type -
Description -
Location Contig635: 80322-84647
Sequence    

Annotation

kegg
ID rcu:RCOM_1080570
description PLE, putative
nr
ID KDP26794.1
description hypothetical protein JCGZ_17952 [Jatropha curcas]
swissprot
ID Q9C7G0
description 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2
trembl
ID A0A067K4R7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17952 PE=4 SV=1
Gene Ontology
ID GO:0008017
description 65-kda microtubule-associated protein 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000635_130 0.0 - - hypothetical protein JCGZ_17952 [Jatropha curcas]
2 Hb_000152_400 0.1273489984 - - PREDICTED: uncharacterized protein LOC105648582 [Jatropha curcas]
3 Hb_020332_020 0.1273708875 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
4 Hb_032050_030 0.127703112 - - C, putative [Ricinus communis]
5 Hb_000202_110 0.1285986438 - - PREDICTED: uncharacterized protein LOC103948916 [Pyrus x bretschneideri]
6 Hb_003060_130 0.1286660225 - - PREDICTED: protein P21-like [Jatropha curcas]
7 Hb_030370_080 0.1296366081 - - hypothetical protein SELMODRAFT_100988 [Selaginella moellendorffii]
8 Hb_002112_030 0.1298067347 - - Alpha-expansin 1 precursor, putative [Ricinus communis]
9 Hb_153625_010 0.1311642193 - - PREDICTED: 21 kDa protein [Populus euphratica]
10 Hb_001148_010 0.1318090132 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_003653_040 0.1326503366 - - hypothetical protein SORBIDRAFT_05g024215 [Sorghum bicolor]
12 Hb_100648_020 0.132835378 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
13 Hb_000015_220 0.1329715056 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os03g0620400-like [Jatropha curcas]
14 Hb_004093_070 0.1334312735 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
15 Hb_135174_010 0.1339934078 - - Glycosyl hydrolase family protein 43 isoform 2 [Theobroma cacao]
16 Hb_004528_030 0.1340010092 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
17 Hb_001140_310 0.1340023235 - - hypothetical protein AMTR_s00025p00025050 [Amborella trichopoda]
18 Hb_008021_030 0.1343012773 - - short-chain dehydrogenase, putative [Ricinus communis]
19 Hb_020956_050 0.1352747446 - - PREDICTED: uncharacterized protein LOC102670328 [Glycine max]
20 Hb_179061_010 0.1360741712 - - hypothetical protein JCGZ_01311 [Jatropha curcas]

Gene co-expression network

sample Hb_000635_130 Hb_000635_130 Hb_000152_400 Hb_000152_400 Hb_000635_130--Hb_000152_400 Hb_020332_020 Hb_020332_020 Hb_000635_130--Hb_020332_020 Hb_032050_030 Hb_032050_030 Hb_000635_130--Hb_032050_030 Hb_000202_110 Hb_000202_110 Hb_000635_130--Hb_000202_110 Hb_003060_130 Hb_003060_130 Hb_000635_130--Hb_003060_130 Hb_030370_080 Hb_030370_080 Hb_000635_130--Hb_030370_080 Hb_000152_400--Hb_020332_020 Hb_000152_400--Hb_032050_030 Hb_000152_400--Hb_000202_110 Hb_000152_400--Hb_003060_130 Hb_000152_400--Hb_030370_080 Hb_002112_030 Hb_002112_030 Hb_000152_400--Hb_002112_030 Hb_020332_020--Hb_032050_030 Hb_020332_020--Hb_000202_110 Hb_020332_020--Hb_003060_130 Hb_020332_020--Hb_030370_080 Hb_020332_020--Hb_002112_030 Hb_032050_030--Hb_030370_080 Hb_032050_030--Hb_002112_030 Hb_153625_010 Hb_153625_010 Hb_032050_030--Hb_153625_010 Hb_032050_030--Hb_000202_110 Hb_000202_110--Hb_003060_130 Hb_001148_010 Hb_001148_010 Hb_000202_110--Hb_001148_010 Hb_003653_040 Hb_003653_040 Hb_000202_110--Hb_003653_040 Hb_135174_010 Hb_135174_010 Hb_000202_110--Hb_135174_010 Hb_003060_130--Hb_001148_010 Hb_003060_130--Hb_003653_040 Hb_003060_130--Hb_135174_010 Hb_030370_080--Hb_002112_030 Hb_030370_080--Hb_153625_010 Hb_100648_020 Hb_100648_020 Hb_030370_080--Hb_100648_020 Hb_004093_070 Hb_004093_070 Hb_030370_080--Hb_004093_070 Hb_179061_010 Hb_179061_010 Hb_030370_080--Hb_179061_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0704794 0 0.0103177
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.24104

CAGE analysis