Hb_000635_170

Information

Type -
Description -
Location Contig635: 110893-112982
Sequence    

Annotation

kegg
ID rcu:RCOM_1080530
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_002514920.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID O65012
description Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1
trembl
ID B9RMF1
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1080530 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 78a5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51919: 111764-113194
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000635_170 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_008931_020 0.1002589121 - - Receptor like protein 46, putative [Theobroma cacao]
3 Hb_013057_010 0.1112446063 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
4 Hb_000336_170 0.118973126 - - Polcalcin Jun o, putative [Ricinus communis]
5 Hb_028487_080 0.1194589964 - - Pectinesterase-1 precursor, putative [Ricinus communis]
6 Hb_000563_380 0.1242174335 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]
7 Hb_000045_110 0.1278286774 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
8 Hb_005529_050 0.1279875072 - - PREDICTED: cytochrome P450 94B3-like [Nelumbo nucifera]
9 Hb_011671_290 0.1296252678 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
10 Hb_005588_150 0.1307988632 - - conserved hypothetical protein [Ricinus communis]
11 Hb_033153_010 0.1320044002 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
12 Hb_004767_040 0.1337985881 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
13 Hb_001031_020 0.1348539812 - - hypothetical protein VITISV_000631 [Vitis vinifera]
14 Hb_027556_080 0.1351483062 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Jatropha curcas]
15 Hb_004108_200 0.1379442678 - - PREDICTED: adenylate isopentenyltransferase 3, chloroplastic [Jatropha curcas]
16 Hb_000959_290 0.139918024 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
17 Hb_000261_540 0.1407464108 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
18 Hb_000876_060 0.1415198354 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004096_040 0.1427305462 - - cytochrome P450, putative [Ricinus communis]
20 Hb_000215_120 0.146996158 - - PREDICTED: putative ABC transporter B family member 8 [Jatropha curcas]

Gene co-expression network

sample Hb_000635_170 Hb_000635_170 Hb_008931_020 Hb_008931_020 Hb_000635_170--Hb_008931_020 Hb_013057_010 Hb_013057_010 Hb_000635_170--Hb_013057_010 Hb_000336_170 Hb_000336_170 Hb_000635_170--Hb_000336_170 Hb_028487_080 Hb_028487_080 Hb_000635_170--Hb_028487_080 Hb_000563_380 Hb_000563_380 Hb_000635_170--Hb_000563_380 Hb_000045_110 Hb_000045_110 Hb_000635_170--Hb_000045_110 Hb_011671_290 Hb_011671_290 Hb_008931_020--Hb_011671_290 Hb_008931_020--Hb_000563_380 Hb_000959_290 Hb_000959_290 Hb_008931_020--Hb_000959_290 Hb_008931_020--Hb_000045_110 Hb_002572_060 Hb_002572_060 Hb_008931_020--Hb_002572_060 Hb_005588_150 Hb_005588_150 Hb_013057_010--Hb_005588_150 Hb_009897_030 Hb_009897_030 Hb_013057_010--Hb_009897_030 Hb_007943_040 Hb_007943_040 Hb_013057_010--Hb_007943_040 Hb_004767_040 Hb_004767_040 Hb_013057_010--Hb_004767_040 Hb_013057_010--Hb_000336_170 Hb_000261_540 Hb_000261_540 Hb_013057_010--Hb_000261_540 Hb_000336_170--Hb_000261_540 Hb_163950_060 Hb_163950_060 Hb_000336_170--Hb_163950_060 Hb_000336_170--Hb_007943_040 Hb_008978_010 Hb_008978_010 Hb_000336_170--Hb_008978_010 Hb_011980_020 Hb_011980_020 Hb_000336_170--Hb_011980_020 Hb_000336_170--Hb_009897_030 Hb_015473_020 Hb_015473_020 Hb_028487_080--Hb_015473_020 Hb_005529_050 Hb_005529_050 Hb_028487_080--Hb_005529_050 Hb_001821_070 Hb_001821_070 Hb_028487_080--Hb_001821_070 Hb_001031_020 Hb_001031_020 Hb_028487_080--Hb_001031_020 Hb_000846_020 Hb_000846_020 Hb_028487_080--Hb_000846_020 Hb_000563_380--Hb_001031_020 Hb_005588_010 Hb_005588_010 Hb_000563_380--Hb_005588_010 Hb_045414_010 Hb_045414_010 Hb_000563_380--Hb_045414_010 Hb_033153_010 Hb_033153_010 Hb_000563_380--Hb_033153_010 Hb_000045_110--Hb_004767_040 Hb_001405_180 Hb_001405_180 Hb_000045_110--Hb_001405_180 Hb_039757_010 Hb_039757_010 Hb_000045_110--Hb_039757_010 Hb_000426_060 Hb_000426_060 Hb_000045_110--Hb_000426_060 Hb_002851_050 Hb_002851_050 Hb_000045_110--Hb_002851_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.339889 162.081 0.78736 8.23152 1.86445 0.599239
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.416 3.77247

CAGE analysis