Hb_000638_040

Information

Type transcription factor
Description TF Family: NF-YB
Location Contig638: 43865-44470
Sequence    

Annotation

kegg
ID gmx:100780647
description nuclear transcription factor Y subunit B-7-like
nr
ID XP_003524310.1
description PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine max]
swissprot
ID Q9SIT9
description Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1
trembl
ID I1K511
description Uncharacterized protein OS=Glycine max PE=4 SV=2
Gene Ontology
ID GO:0005634
description nuclear transcription factor y subunit b-7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000638_040 0.0 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine max]
2 Hb_005142_010 0.1362014651 - - -
3 Hb_005841_030 0.1363888663 - - -
4 Hb_000572_050 0.1371202515 - - PREDICTED: transcriptional adapter ADA2b isoform X1 [Cicer arietinum]
5 Hb_001403_030 0.1451700198 - - -
6 Hb_000971_060 0.1469011705 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_000201_020 0.1476843864 - - hypothetical protein CICLE_v10024145mg [Citrus clementina]
8 Hb_001545_250 0.1478384376 - - PREDICTED: uncharacterized protein LOC103936764 [Pyrus x bretschneideri]
9 Hb_008839_030 0.151195665 - - conserved hypothetical protein [Ricinus communis]
10 Hb_010760_010 0.1515024929 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_060455_010 0.1534709258 - - 50 kDa protein [Hevea brasiliensis]
12 Hb_070247_010 0.1540719829 - - hypothetical protein [Pseudomonas tolaasii]
13 Hb_020818_010 0.1548131265 - - PREDICTED: uncharacterized protein LOC105648455 isoform X2 [Jatropha curcas]
14 Hb_000450_140 0.1559620345 - - hypothetical protein POPTR_0009s06810g [Populus trichocarpa]
15 Hb_012286_070 0.1560095114 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
16 Hb_154340_010 0.165157498 - - truncated nitrate transporter [Fragaria vesca]
17 Hb_007177_010 0.1817027483 - - -
18 Hb_005020_010 0.1838917391 - - -
19 Hb_000440_030 0.1866193296 - - 50 kDa protein [Hevea brasiliensis]
20 Hb_006355_050 0.1918009521 - - -

Gene co-expression network

sample Hb_000638_040 Hb_000638_040 Hb_005142_010 Hb_005142_010 Hb_000638_040--Hb_005142_010 Hb_005841_030 Hb_005841_030 Hb_000638_040--Hb_005841_030 Hb_000572_050 Hb_000572_050 Hb_000638_040--Hb_000572_050 Hb_001403_030 Hb_001403_030 Hb_000638_040--Hb_001403_030 Hb_000971_060 Hb_000971_060 Hb_000638_040--Hb_000971_060 Hb_000201_020 Hb_000201_020 Hb_000638_040--Hb_000201_020 Hb_005142_010--Hb_005841_030 Hb_005142_010--Hb_000572_050 Hb_005142_010--Hb_001403_030 Hb_005142_010--Hb_000971_060 Hb_005142_010--Hb_000201_020 Hb_001545_250 Hb_001545_250 Hb_005142_010--Hb_001545_250 Hb_005841_030--Hb_000572_050 Hb_005841_030--Hb_001403_030 Hb_005841_030--Hb_000971_060 Hb_005841_030--Hb_000201_020 Hb_005841_030--Hb_001545_250 Hb_000572_050--Hb_001403_030 Hb_000572_050--Hb_000971_060 Hb_000572_050--Hb_000201_020 Hb_000572_050--Hb_001545_250 Hb_001403_030--Hb_000971_060 Hb_001403_030--Hb_000201_020 Hb_001403_030--Hb_001545_250 Hb_010760_010 Hb_010760_010 Hb_001403_030--Hb_010760_010 Hb_070247_010 Hb_070247_010 Hb_001403_030--Hb_070247_010 Hb_020818_010 Hb_020818_010 Hb_001403_030--Hb_020818_010 Hb_000971_060--Hb_000201_020 Hb_000971_060--Hb_001545_250 Hb_000971_060--Hb_010760_010 Hb_000971_060--Hb_070247_010 Hb_000971_060--Hb_020818_010 Hb_000201_020--Hb_001545_250 Hb_000201_020--Hb_010760_010 Hb_000201_020--Hb_070247_010 Hb_000201_020--Hb_020818_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0828735 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 2.05444 0.128196 0

CAGE analysis