Hb_000640_130

Information

Type transcription factor
Description TF Family: SET
Location Contig640: 95252-103191
Sequence    

Annotation

kegg
ID rcu:RCOM_1347120
description enhancer of zeste, ezh, putative (EC:2.1.1.43)
nr
ID CBI36953.3
description unnamed protein product [Vitis vinifera]
swissprot
ID Q8S4P5
description Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 PE=2 SV=1
trembl
ID B9RNE0
description Enhancer of zeste, ezh, putative OS=Ricinus communis GN=RCOM_1347120 PE=4 SV=1
Gene Ontology
ID GO:0005677
description enhancer of

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52088: 95355-96504 , PASA_asmbl_52089: 98136-98682 , PASA_asmbl_52090: 99576-101070
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000640_130 0.0 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
2 Hb_000215_100 0.0848822906 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001416_020 0.0992537801 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
4 Hb_000976_040 0.0998064644 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
5 Hb_002005_090 0.1047559592 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011716_090 0.1058072761 transcription factor TF Family: HRT putative transciption factor family protein [Populus trichocarpa]
7 Hb_000521_170 0.1059568728 - - PREDICTED: callose synthase 1 [Jatropha curcas]
8 Hb_000200_280 0.1083670258 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
9 Hb_002827_020 0.1125168975 - - PREDICTED: plant intracellular Ras-group-related LRR protein 5-like [Jatropha curcas]
10 Hb_000283_150 0.1168948291 - - Ankyrin repeat family protein [Theobroma cacao]
11 Hb_008143_070 0.1188647085 - - PREDICTED: factor of DNA methylation 4 [Jatropha curcas]
12 Hb_000237_190 0.1189448644 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3 isoform X1 [Jatropha curcas]
13 Hb_001055_030 0.121821197 - - PREDICTED: F-box/LRR-repeat protein 14 isoform X1 [Jatropha curcas]
14 Hb_001575_010 0.1221578912 - - PREDICTED: pumilio homolog 6, chloroplastic isoform X1 [Jatropha curcas]
15 Hb_000009_330 0.1240034012 transcription factor TF Family: LIM zinc ion binding protein, putative [Ricinus communis]
16 Hb_005143_030 0.124024042 - - PREDICTED: uncharacterized protein LOC105638843 [Jatropha curcas]
17 Hb_089140_030 0.1258286842 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
18 Hb_000069_410 0.1277310276 - - PREDICTED: protein SDE2 homolog [Jatropha curcas]
19 Hb_000627_180 0.1301676041 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003849_240 0.1303854391 - - leucine-rich repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000640_130 Hb_000640_130 Hb_000215_100 Hb_000215_100 Hb_000640_130--Hb_000215_100 Hb_001416_020 Hb_001416_020 Hb_000640_130--Hb_001416_020 Hb_000976_040 Hb_000976_040 Hb_000640_130--Hb_000976_040 Hb_002005_090 Hb_002005_090 Hb_000640_130--Hb_002005_090 Hb_011716_090 Hb_011716_090 Hb_000640_130--Hb_011716_090 Hb_000521_170 Hb_000521_170 Hb_000640_130--Hb_000521_170 Hb_001055_030 Hb_001055_030 Hb_000215_100--Hb_001055_030 Hb_000215_100--Hb_000976_040 Hb_000009_330 Hb_000009_330 Hb_000215_100--Hb_000009_330 Hb_001318_020 Hb_001318_020 Hb_000215_100--Hb_001318_020 Hb_008160_030 Hb_008160_030 Hb_000215_100--Hb_008160_030 Hb_001416_020--Hb_000521_170 Hb_000283_150 Hb_000283_150 Hb_001416_020--Hb_000283_150 Hb_001575_010 Hb_001575_010 Hb_001416_020--Hb_001575_010 Hb_005143_030 Hb_005143_030 Hb_001416_020--Hb_005143_030 Hb_001416_020--Hb_011716_090 Hb_000853_120 Hb_000853_120 Hb_000976_040--Hb_000853_120 Hb_000200_280 Hb_000200_280 Hb_000976_040--Hb_000200_280 Hb_011512_090 Hb_011512_090 Hb_000976_040--Hb_011512_090 Hb_156850_070 Hb_156850_070 Hb_000976_040--Hb_156850_070 Hb_000976_040--Hb_005143_030 Hb_005048_100 Hb_005048_100 Hb_002005_090--Hb_005048_100 Hb_003849_240 Hb_003849_240 Hb_002005_090--Hb_003849_240 Hb_000823_030 Hb_000823_030 Hb_002005_090--Hb_000823_030 Hb_000069_410 Hb_000069_410 Hb_002005_090--Hb_000069_410 Hb_003058_060 Hb_003058_060 Hb_002005_090--Hb_003058_060 Hb_002005_090--Hb_001575_010 Hb_089140_030 Hb_089140_030 Hb_011716_090--Hb_089140_030 Hb_011716_090--Hb_000200_280 Hb_002693_060 Hb_002693_060 Hb_011716_090--Hb_002693_060 Hb_002827_020 Hb_002827_020 Hb_011716_090--Hb_002827_020 Hb_003211_010 Hb_003211_010 Hb_011716_090--Hb_003211_010 Hb_000032_310 Hb_000032_310 Hb_000521_170--Hb_000032_310 Hb_000932_070 Hb_000932_070 Hb_000521_170--Hb_000932_070 Hb_011828_030 Hb_011828_030 Hb_000521_170--Hb_011828_030 Hb_011671_230 Hb_011671_230 Hb_000521_170--Hb_011671_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.231 23.6319 4.80623 9.68277 15.5427 10.6022
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.76852 3.88881 3.94296 24.1737 4.77419

CAGE analysis