Hb_000641_030

Information

Type -
Description -
Location Contig641: 27875-37497
Sequence    

Annotation

kegg
ID rcu:RCOM_0248610
description pyruvate kinase, putative (EC:2.7.1.40)
nr
ID XP_012086002.1
description PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
swissprot
ID Q42806
description Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1
trembl
ID A0A067JQN6
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_22492 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate cytosolic isozyme-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52172: 31428-35857
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000641_030 0.0 - - PREDICTED: pyruvate kinase, cytosolic isozyme-like [Jatropha curcas]
2 Hb_003304_050 0.1216323236 - - PREDICTED: uncharacterized protein LOC105633679 isoform X1 [Jatropha curcas]
3 Hb_000376_110 0.1240876272 - - PREDICTED: O-acyltransferase WSD1-like [Brachypodium distachyon]
4 Hb_000376_150 0.1387799501 - - O-acyltransferase WSD1 [Gossypium arboreum]
5 Hb_003687_200 0.1439854553 - - PREDICTED: uncharacterized protein LOC105632139 [Jatropha curcas]
6 Hb_000920_140 0.1472972308 - - annexin [Manihot esculenta]
7 Hb_000416_100 0.1480107521 - - PREDICTED: uncharacterized protein LOC105649721 [Jatropha curcas]
8 Hb_001916_130 0.1525522173 - - Uncharacterized protein TCM_002409 [Theobroma cacao]
9 Hb_004724_430 0.1539173582 - - PREDICTED: F-box protein At2g27310 [Jatropha curcas]
10 Hb_001454_390 0.1540861977 - - 8-kd dynein light chain, DLC8, pin [Thalassiosira pseudonana CCMP1335]
11 Hb_003304_080 0.154255967 transcription factor TF Family: bHLH lMYC3 [Hevea brasiliensis]
12 Hb_002078_430 0.1558816443 - - hypothetical protein PRUPE_ppa014280mg [Prunus persica]
13 Hb_002388_060 0.1593575698 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001956_120 0.1602238394 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000062_230 0.1607784829 - - PREDICTED: probable thimet oligopeptidase isoform X1 [Jatropha curcas]
16 Hb_000548_030 0.1612080186 rubber biosynthesis Gene Name: CPT5 PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Beta vulgaris subsp. vulgaris]
17 Hb_023988_020 0.164139471 - - PREDICTED: transmembrane protein 19 [Prunus mume]
18 Hb_000347_080 0.1643138666 - - PREDICTED: 25.3 kDa vesicle transport protein [Jatropha curcas]
19 Hb_000056_120 0.1656853344 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
20 Hb_012977_010 0.1669588497 - - PREDICTED: uncharacterized protein LOC105131558 [Populus euphratica]

Gene co-expression network

sample Hb_000641_030 Hb_000641_030 Hb_003304_050 Hb_003304_050 Hb_000641_030--Hb_003304_050 Hb_000376_110 Hb_000376_110 Hb_000641_030--Hb_000376_110 Hb_000376_150 Hb_000376_150 Hb_000641_030--Hb_000376_150 Hb_003687_200 Hb_003687_200 Hb_000641_030--Hb_003687_200 Hb_000920_140 Hb_000920_140 Hb_000641_030--Hb_000920_140 Hb_000416_100 Hb_000416_100 Hb_000641_030--Hb_000416_100 Hb_003304_050--Hb_003687_200 Hb_000548_030 Hb_000548_030 Hb_003304_050--Hb_000548_030 Hb_026447_030 Hb_026447_030 Hb_003304_050--Hb_026447_030 Hb_003654_010 Hb_003654_010 Hb_003304_050--Hb_003654_010 Hb_002027_220 Hb_002027_220 Hb_003304_050--Hb_002027_220 Hb_000376_110--Hb_000920_140 Hb_023988_020 Hb_023988_020 Hb_000376_110--Hb_023988_020 Hb_004032_440 Hb_004032_440 Hb_000376_110--Hb_004032_440 Hb_001696_030 Hb_001696_030 Hb_000376_110--Hb_001696_030 Hb_007810_040 Hb_007810_040 Hb_000376_110--Hb_007810_040 Hb_098315_100 Hb_098315_100 Hb_000376_150--Hb_098315_100 Hb_002506_110 Hb_002506_110 Hb_000376_150--Hb_002506_110 Hb_003304_080 Hb_003304_080 Hb_000376_150--Hb_003304_080 Hb_002627_060 Hb_002627_060 Hb_000376_150--Hb_002627_060 Hb_000172_610 Hb_000172_610 Hb_000376_150--Hb_000172_610 Hb_000050_120 Hb_000050_120 Hb_000376_150--Hb_000050_120 Hb_017111_010 Hb_017111_010 Hb_003687_200--Hb_017111_010 Hb_000186_100 Hb_000186_100 Hb_003687_200--Hb_000186_100 Hb_000009_640 Hb_000009_640 Hb_003687_200--Hb_000009_640 Hb_003687_200--Hb_000416_100 Hb_000920_140--Hb_023988_020 Hb_000920_140--Hb_004032_440 Hb_000920_140--Hb_001696_030 Hb_000762_020 Hb_000762_020 Hb_000920_140--Hb_000762_020 Hb_019516_040 Hb_019516_040 Hb_000920_140--Hb_019516_040 Hb_001825_010 Hb_001825_010 Hb_000416_100--Hb_001825_010 Hb_002388_060 Hb_002388_060 Hb_000416_100--Hb_002388_060 Hb_007545_210 Hb_007545_210 Hb_000416_100--Hb_007545_210 Hb_000714_020 Hb_000714_020 Hb_000416_100--Hb_000714_020 Hb_004738_090 Hb_004738_090 Hb_000416_100--Hb_004738_090 Hb_000365_350 Hb_000365_350 Hb_000416_100--Hb_000365_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
103.89 5.15353 6.63899 16.4774 63.9181 43.0379
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
54.5799 16.8421 14.4077 1.68806 2.30889

CAGE analysis