Hb_000648_050

Information

Type -
Description -
Location Contig648: 90818-95042
Sequence    

Annotation

kegg
ID rcu:RCOM_1602670
description Polyneuridine-aldehyde esterase precursor, putative (EC:3.1.1.78)
nr
ID XP_012073514.1
description PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
swissprot
ID Q940H7
description Putative methylesterase 12, chloroplastic OS=Arabidopsis thaliana GN=MES12 PE=2 SV=1
trembl
ID A0A067KP22
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07994 PE=4 SV=1
Gene Ontology
ID GO:0050529
description methylesterase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52421: 91074-94880
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000648_050 0.0 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
2 Hb_000270_180 0.103612774 - - PREDICTED: HIPL1 protein-like [Jatropha curcas]
3 Hb_007590_090 0.1156324923 - - PREDICTED: O-glucosyltransferase rumi [Jatropha curcas]
4 Hb_002486_080 0.1194293117 - - PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Jatropha curcas]
5 Hb_000017_260 0.1285443399 - - hypothetical protein POPTR_0003s13070g [Populus trichocarpa]
6 Hb_001817_100 0.1346475584 - - PREDICTED: deoxyhypusine hydroxylase [Jatropha curcas]
7 Hb_000009_520 0.1356959827 - - PREDICTED: wall-associated receptor kinase-like 14 [Jatropha curcas]
8 Hb_012807_130 0.1376541436 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
9 Hb_001998_200 0.1384619337 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
10 Hb_002534_130 0.1434986473 - - membrane associated ring finger 1,8, putative [Ricinus communis]
11 Hb_000889_010 0.1435441682 transcription factor TF Family: MYB-related hypothetical protein PRUPE_ppa014728mg [Prunus persica]
12 Hb_009898_040 0.1438728929 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000666_010 0.1444960527 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001250_090 0.1452989482 - - PREDICTED: protein NSP-INTERACTING KINASE 3 [Jatropha curcas]
15 Hb_007416_110 0.1470534248 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
16 Hb_027380_190 0.1492970701 - - PREDICTED: uncharacterized protein LOC105634028 isoform X1 [Jatropha curcas]
17 Hb_000684_520 0.1495176662 - - glutathione S-transferase L3-like [Jatropha curcas]
18 Hb_001301_280 0.150940038 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000172_280 0.1526276661 - - aspartate aminotransferase, putative [Ricinus communis]
20 Hb_006637_030 0.1531601869 - - hypothetical protein CISIN_1g017413mg [Citrus sinensis]

Gene co-expression network

sample Hb_000648_050 Hb_000648_050 Hb_000270_180 Hb_000270_180 Hb_000648_050--Hb_000270_180 Hb_007590_090 Hb_007590_090 Hb_000648_050--Hb_007590_090 Hb_002486_080 Hb_002486_080 Hb_000648_050--Hb_002486_080 Hb_000017_260 Hb_000017_260 Hb_000648_050--Hb_000017_260 Hb_001817_100 Hb_001817_100 Hb_000648_050--Hb_001817_100 Hb_000009_520 Hb_000009_520 Hb_000648_050--Hb_000009_520 Hb_002249_070 Hb_002249_070 Hb_000270_180--Hb_002249_070 Hb_000368_030 Hb_000368_030 Hb_000270_180--Hb_000368_030 Hb_000220_030 Hb_000220_030 Hb_000270_180--Hb_000220_030 Hb_000684_520 Hb_000684_520 Hb_000270_180--Hb_000684_520 Hb_029385_010 Hb_029385_010 Hb_000270_180--Hb_029385_010 Hb_007590_090--Hb_001817_100 Hb_002615_030 Hb_002615_030 Hb_007590_090--Hb_002615_030 Hb_004007_110 Hb_004007_110 Hb_007590_090--Hb_004007_110 Hb_001998_200 Hb_001998_200 Hb_007590_090--Hb_001998_200 Hb_000012_110 Hb_000012_110 Hb_007590_090--Hb_000012_110 Hb_002217_100 Hb_002217_100 Hb_007590_090--Hb_002217_100 Hb_001301_280 Hb_001301_280 Hb_002486_080--Hb_001301_280 Hb_001951_060 Hb_001951_060 Hb_002486_080--Hb_001951_060 Hb_007416_070 Hb_007416_070 Hb_002486_080--Hb_007416_070 Hb_000465_150 Hb_000465_150 Hb_002486_080--Hb_000465_150 Hb_002281_020 Hb_002281_020 Hb_002486_080--Hb_002281_020 Hb_001571_060 Hb_001571_060 Hb_002486_080--Hb_001571_060 Hb_053709_050 Hb_053709_050 Hb_000017_260--Hb_053709_050 Hb_000227_390 Hb_000227_390 Hb_000017_260--Hb_000227_390 Hb_185830_060 Hb_185830_060 Hb_000017_260--Hb_185830_060 Hb_002193_060 Hb_002193_060 Hb_000017_260--Hb_002193_060 Hb_012262_030 Hb_012262_030 Hb_000017_260--Hb_012262_030 Hb_000590_120 Hb_000590_120 Hb_000017_260--Hb_000590_120 Hb_001817_100--Hb_002217_100 Hb_001817_100--Hb_002615_030 Hb_000023_310 Hb_000023_310 Hb_001817_100--Hb_000023_310 Hb_002007_320 Hb_002007_320 Hb_001817_100--Hb_002007_320 Hb_001817_100--Hb_001998_200 Hb_000193_260 Hb_000193_260 Hb_000009_520--Hb_000193_260 Hb_002686_150 Hb_002686_150 Hb_000009_520--Hb_002686_150 Hb_026198_010 Hb_026198_010 Hb_000009_520--Hb_026198_010 Hb_005946_150 Hb_005946_150 Hb_000009_520--Hb_005946_150 Hb_002235_390 Hb_002235_390 Hb_000009_520--Hb_002235_390 Hb_002203_030 Hb_002203_030 Hb_000009_520--Hb_002203_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.50875 9.41903 13.5303 17.6659 0.388695 2.49646
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.2707 7.21701 6.57515 15.3749 9.39074

CAGE analysis