Hb_000649_050

Information

Type -
Description -
Location Contig649: 44435-48487
Sequence    

Annotation

kegg
ID rcu:RCOM_0598030
description Myosin heavy chain, clone, putative
nr
ID XP_012072308.1
description PREDICTED: microtubule-associated protein 70-2-like isoform X1 [Jatropha curcas]
swissprot
ID Q8L7S4
description Microtubule-associated protein 70-2 OS=Arabidopsis thaliana GN=MAP70.2 PE=1 SV=1
trembl
ID A0A067L1Z7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04762 PE=4 SV=1
Gene Ontology
ID GO:0008017
description microtubule-associated protein 70-2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52477: 42354-48349
cDNA
(Sanger)
(ID:Location)		 008_D06.ab1: 46432-48268

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000649_050 0.0 - - PREDICTED: microtubule-associated protein 70-2-like isoform X1 [Jatropha curcas]
2 Hb_003641_050 0.0791231114 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic [Jatropha curcas]
3 Hb_000922_330 0.0983034267 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
4 Hb_002681_050 0.1062390981 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
5 Hb_001100_050 0.1068876312 - - PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Malus domestica]
6 Hb_003376_050 0.1070465005 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
7 Hb_007477_080 0.1081043153 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000606_090 0.1093426878 - - Far upstream element-binding protein, putative [Ricinus communis]
9 Hb_004007_160 0.1109609706 - - PREDICTED: formin-like protein 6 [Jatropha curcas]
10 Hb_004705_040 0.1110216745 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
11 Hb_000679_130 0.1129981487 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
12 Hb_001673_010 0.1134997874 - - PREDICTED: uncharacterized protein LOC105635783 isoform X3 [Jatropha curcas]
13 Hb_006816_390 0.1146314616 - - protein phosphatase, putative [Ricinus communis]
14 Hb_007451_050 0.115124509 - - PREDICTED: uncharacterized protein LOC105643409 isoform X1 [Jatropha curcas]
15 Hb_001638_290 0.117680174 rubber biosynthesis Gene Name: Pyruvate dehydrogenase pyruvate dehydrogenase, putative [Ricinus communis]
16 Hb_073171_040 0.1184559869 - - malic enzyme, putative [Ricinus communis]
17 Hb_000299_040 0.1209128467 - - PREDICTED: protein S-acyltransferase 10 isoform X1 [Jatropha curcas]
18 Hb_000554_010 0.1211946022 - - transporter, putative [Ricinus communis]
19 Hb_000010_090 0.1218977365 - - PREDICTED: afadin- and alpha-actinin-binding protein isoform X1 [Jatropha curcas]
20 Hb_001348_180 0.125310406 - - PREDICTED: TLC domain-containing protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000649_050 Hb_000649_050 Hb_003641_050 Hb_003641_050 Hb_000649_050--Hb_003641_050 Hb_000922_330 Hb_000922_330 Hb_000649_050--Hb_000922_330 Hb_002681_050 Hb_002681_050 Hb_000649_050--Hb_002681_050 Hb_001100_050 Hb_001100_050 Hb_000649_050--Hb_001100_050 Hb_003376_050 Hb_003376_050 Hb_000649_050--Hb_003376_050 Hb_007477_080 Hb_007477_080 Hb_000649_050--Hb_007477_080 Hb_003641_050--Hb_000922_330 Hb_000481_040 Hb_000481_040 Hb_003641_050--Hb_000481_040 Hb_005662_030 Hb_005662_030 Hb_003641_050--Hb_005662_030 Hb_003641_050--Hb_007477_080 Hb_003641_050--Hb_001100_050 Hb_014720_160 Hb_014720_160 Hb_000922_330--Hb_014720_160 Hb_000085_060 Hb_000085_060 Hb_000922_330--Hb_000085_060 Hb_000679_130 Hb_000679_130 Hb_000922_330--Hb_000679_130 Hb_000922_330--Hb_005662_030 Hb_002527_030 Hb_002527_030 Hb_000922_330--Hb_002527_030 Hb_000606_090 Hb_000606_090 Hb_002681_050--Hb_000606_090 Hb_002681_050--Hb_007477_080 Hb_001377_320 Hb_001377_320 Hb_002681_050--Hb_001377_320 Hb_073171_040 Hb_073171_040 Hb_002681_050--Hb_073171_040 Hb_008511_130 Hb_008511_130 Hb_002681_050--Hb_008511_130 Hb_002529_060 Hb_002529_060 Hb_002681_050--Hb_002529_060 Hb_000699_140 Hb_000699_140 Hb_001100_050--Hb_000699_140 Hb_001100_050--Hb_007477_080 Hb_000620_010 Hb_000620_010 Hb_001100_050--Hb_000620_010 Hb_006816_390 Hb_006816_390 Hb_001100_050--Hb_006816_390 Hb_000072_220 Hb_000072_220 Hb_001100_050--Hb_000072_220 Hb_002942_060 Hb_002942_060 Hb_003376_050--Hb_002942_060 Hb_000797_050 Hb_000797_050 Hb_003376_050--Hb_000797_050 Hb_000606_080 Hb_000606_080 Hb_003376_050--Hb_000606_080 Hb_000197_210 Hb_000197_210 Hb_003376_050--Hb_000197_210 Hb_004375_130 Hb_004375_130 Hb_003376_050--Hb_004375_130 Hb_007477_080--Hb_006816_390 Hb_001862_190 Hb_001862_190 Hb_007477_080--Hb_001862_190 Hb_033153_050 Hb_033153_050 Hb_007477_080--Hb_033153_050 Hb_000134_090 Hb_000134_090 Hb_007477_080--Hb_000134_090 Hb_007477_080--Hb_000699_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
75.5622 12.1046 28.5225 37.5994 40.2611 77.9987
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.2593 24.6511 41.609 14.2841 41.3149

CAGE analysis