Hb_000661_160

Information

Type -
Description -
Location Contig661: 143896-149242
Sequence    

Annotation

kegg
ID rcu:RCOM_1578950
description hexokinase, putative (EC:2.7.1.1)
nr
ID AHY84732.1
description hexokinase [Manihot esculenta]
swissprot
ID Q9LPS1
description Hexokinase-3 OS=Arabidopsis thaliana GN=At1g50460 PE=1 SV=1
trembl
ID A0A023ZYL3
description Hexokinase OS=Manihot esculenta GN=HXK3 PE=2 SV=1
Gene Ontology
ID GO:0004396
description hexokinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52975: 143995-149213 , PASA_asmbl_52976: 144652-144818
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000661_160 0.0 - - hexokinase [Manihot esculenta]
2 Hb_000211_110 0.1062908987 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Jatropha curcas]
3 Hb_000261_110 0.107181422 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
4 Hb_009111_040 0.1139995581 - - PREDICTED: protein downstream neighbor of Son [Jatropha curcas]
5 Hb_000313_300 0.1142398289 - - PREDICTED: F-box protein SKIP19-like [Jatropha curcas]
6 Hb_000106_130 0.1190921453 - - unnamed protein product [Vitis vinifera]
7 Hb_004032_060 0.1198623549 - - elongation factor 1 gamma-like protein, partial [Ipomoea nil]
8 Hb_000920_280 0.1202605348 - - Protein SENSITIVITY TO RED LIGHT REDUCED, putative [Ricinus communis]
9 Hb_006634_040 0.1203708991 - - hypothetical protein VITISV_030841 [Vitis vinifera]
10 Hb_000358_250 0.1208714526 - - PREDICTED: cell division cycle protein 27 homolog B [Jatropha curcas]
11 Hb_091384_010 0.1247760645 - - hypothetical protein JCGZ_09207 [Jatropha curcas]
12 Hb_097783_020 0.1248797446 - - PREDICTED: small G protein signaling modulator 1 [Jatropha curcas]
13 Hb_001357_380 0.1252938377 - - PREDICTED: probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X1 [Jatropha curcas]
14 Hb_017259_010 0.125313838 - - -
15 Hb_000482_110 0.1258319141 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_000290_020 0.132885644 - - PREDICTED: eukaryotic translation initiation factor 3 subunit K-like isoform X2 [Populus euphratica]
17 Hb_009838_130 0.1334916772 - - hypothetical protein CISIN_1g010403mg [Citrus sinensis]
18 Hb_000540_150 0.1338762875 - - PREDICTED: uncharacterized protein YKR070W [Jatropha curcas]
19 Hb_008518_050 0.1343518142 - - hypothetical protein F383_31148 [Gossypium arboreum]
20 Hb_003788_050 0.1348729466 - - PREDICTED: interferon-induced guanylate-binding protein 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000661_160 Hb_000661_160 Hb_000211_110 Hb_000211_110 Hb_000661_160--Hb_000211_110 Hb_000261_110 Hb_000261_110 Hb_000661_160--Hb_000261_110 Hb_009111_040 Hb_009111_040 Hb_000661_160--Hb_009111_040 Hb_000313_300 Hb_000313_300 Hb_000661_160--Hb_000313_300 Hb_000106_130 Hb_000106_130 Hb_000661_160--Hb_000106_130 Hb_004032_060 Hb_004032_060 Hb_000661_160--Hb_004032_060 Hb_001894_030 Hb_001894_030 Hb_000211_110--Hb_001894_030 Hb_001357_380 Hb_001357_380 Hb_000211_110--Hb_001357_380 Hb_000920_280 Hb_000920_280 Hb_000211_110--Hb_000920_280 Hb_000640_020 Hb_000640_020 Hb_000211_110--Hb_000640_020 Hb_011848_010 Hb_011848_010 Hb_000211_110--Hb_011848_010 Hb_000059_140 Hb_000059_140 Hb_000211_110--Hb_000059_140 Hb_000261_110--Hb_001357_380 Hb_000261_110--Hb_000313_300 Hb_017259_010 Hb_017259_010 Hb_000261_110--Hb_017259_010 Hb_012799_110 Hb_012799_110 Hb_000261_110--Hb_012799_110 Hb_033095_020 Hb_033095_020 Hb_000261_110--Hb_033095_020 Hb_003029_030 Hb_003029_030 Hb_009111_040--Hb_003029_030 Hb_009111_040--Hb_000313_300 Hb_009111_040--Hb_001357_380 Hb_009111_040--Hb_000261_110 Hb_006824_060 Hb_006824_060 Hb_009111_040--Hb_006824_060 Hb_000313_300--Hb_000106_130 Hb_097783_020 Hb_097783_020 Hb_000313_300--Hb_097783_020 Hb_000313_300--Hb_000211_110 Hb_000313_300--Hb_001357_380 Hb_000785_030 Hb_000785_030 Hb_000313_300--Hb_000785_030 Hb_006916_040 Hb_006916_040 Hb_000313_300--Hb_006916_040 Hb_000106_130--Hb_001357_380 Hb_000106_130--Hb_000211_110 Hb_000106_130--Hb_000785_030 Hb_000106_130--Hb_001894_030 Hb_000174_110 Hb_000174_110 Hb_000106_130--Hb_000174_110 Hb_000307_170 Hb_000307_170 Hb_004032_060--Hb_000307_170 Hb_001951_260 Hb_001951_260 Hb_004032_060--Hb_001951_260 Hb_000482_110 Hb_000482_110 Hb_004032_060--Hb_000482_110 Hb_004032_050 Hb_004032_050 Hb_004032_060--Hb_004032_050 Hb_000290_020 Hb_000290_020 Hb_004032_060--Hb_000290_020 Hb_025236_040 Hb_025236_040 Hb_004032_060--Hb_025236_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.78204 5.0765 6.02357 5.66305 17.4267 12.0557
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.3005 6.54446 1.5556 2.10207 2.07885

CAGE analysis