Hb_000666_020

Information

Type -
Description -
Location Contig666: 13420-14192
Sequence    

Annotation

kegg
ID rcu:RCOM_0844140
description Major latex protein, putative
nr
ID XP_002526038.1
description Major latex protein, putative [Ricinus communis]
swissprot
ID Q9ZVF3
description MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=2 SV=1
trembl
ID B9SJ69
description Major latex protein, putative OS=Ricinus communis GN=RCOM_0844140 PE=4 SV=1
Gene Ontology
ID GO:0006952
description mlp-like protein 328

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000666_020 0.0 - - Major latex protein, putative [Ricinus communis]
2 Hb_137695_010 0.0674270156 - - PREDICTED: wall-associated receptor kinase 2-like [Malus domestica]
3 Hb_002837_140 0.0709425008 - - hypothetical protein JCGZ_05022 [Jatropha curcas]
4 Hb_115007_010 0.1305445714 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
5 Hb_000046_060 0.134388414 - - sugar transporter, putative [Ricinus communis]
6 Hb_015227_010 0.1382541949 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
7 Hb_011282_070 0.1384105551 - - ATP binding protein, putative [Ricinus communis]
8 Hb_020581_020 0.1393269937 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
9 Hb_021419_060 0.1468424371 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
10 Hb_000130_210 0.1470354749 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
11 Hb_001959_280 0.151766134 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
12 Hb_001675_230 0.1535860508 - - scab resistance family protein [Populus trichocarpa]
13 Hb_004190_010 0.154892404 - - unnamed protein product [Vitis vinifera]
14 Hb_007342_020 0.1571681007 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
15 Hb_009012_020 0.1630806144 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Populus euphratica]
16 Hb_181968_010 0.1660090565 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
17 Hb_135684_010 0.167125226 - - hypothetical protein [Pseudomonas tolaasii]
18 Hb_108884_020 0.1691220021 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
19 Hb_064398_010 0.1859994111 - - cytochrome P450, putative [Ricinus communis]
20 Hb_125644_010 0.18972061 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]

Gene co-expression network

sample Hb_000666_020 Hb_000666_020 Hb_137695_010 Hb_137695_010 Hb_000666_020--Hb_137695_010 Hb_002837_140 Hb_002837_140 Hb_000666_020--Hb_002837_140 Hb_115007_010 Hb_115007_010 Hb_000666_020--Hb_115007_010 Hb_000046_060 Hb_000046_060 Hb_000666_020--Hb_000046_060 Hb_015227_010 Hb_015227_010 Hb_000666_020--Hb_015227_010 Hb_011282_070 Hb_011282_070 Hb_000666_020--Hb_011282_070 Hb_137695_010--Hb_002837_140 Hb_137695_010--Hb_015227_010 Hb_135684_010 Hb_135684_010 Hb_137695_010--Hb_135684_010 Hb_020581_020 Hb_020581_020 Hb_137695_010--Hb_020581_020 Hb_001959_280 Hb_001959_280 Hb_137695_010--Hb_001959_280 Hb_002837_140--Hb_001959_280 Hb_002837_140--Hb_015227_010 Hb_004190_010 Hb_004190_010 Hb_002837_140--Hb_004190_010 Hb_002837_140--Hb_020581_020 Hb_007342_020 Hb_007342_020 Hb_115007_010--Hb_007342_020 Hb_000537_120 Hb_000537_120 Hb_115007_010--Hb_000537_120 Hb_000120_700 Hb_000120_700 Hb_115007_010--Hb_000120_700 Hb_000483_020 Hb_000483_020 Hb_115007_010--Hb_000483_020 Hb_001114_220 Hb_001114_220 Hb_115007_010--Hb_001114_220 Hb_064398_010 Hb_064398_010 Hb_115007_010--Hb_064398_010 Hb_009012_020 Hb_009012_020 Hb_000046_060--Hb_009012_020 Hb_108884_020 Hb_108884_020 Hb_000046_060--Hb_108884_020 Hb_000046_060--Hb_004190_010 Hb_000130_210 Hb_000130_210 Hb_000046_060--Hb_000130_210 Hb_004463_040 Hb_004463_040 Hb_000046_060--Hb_004463_040 Hb_015227_010--Hb_135684_010 Hb_015227_010--Hb_001959_280 Hb_010866_010 Hb_010866_010 Hb_015227_010--Hb_010866_010 Hb_021419_060 Hb_021419_060 Hb_011282_070--Hb_021419_060 Hb_011282_070--Hb_004463_040 Hb_002048_010 Hb_002048_010 Hb_011282_070--Hb_002048_010 Hb_020332_040 Hb_020332_040 Hb_011282_070--Hb_020332_040 Hb_000422_020 Hb_000422_020 Hb_011282_070--Hb_000422_020 Hb_000683_010 Hb_000683_010 Hb_011282_070--Hb_000683_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.150562 16.9857 0.212614 0.24372 0.151615 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0918621 0 0 118.136 18.062

CAGE analysis