Hb_000668_130

Information

Type -
Description -
Location Contig668: 102110-103296
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000668_130 0.0 - - -
2 Hb_003687_220 0.2670350703 transcription factor TF Family: MYB hypothetical protein POPTR_0008s16660g [Populus trichocarpa]
3 Hb_177019_010 0.2922440685 - - Uncharacterized protein TCM_004012 [Theobroma cacao]
4 Hb_011794_100 0.2950891203 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
5 Hb_000416_030 0.2951284106 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
6 Hb_001226_190 0.3037886758 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
7 Hb_002000_120 0.3077792991 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_002085_040 0.3122012926 - - structural constituent of cell wall, putative [Ricinus communis]
9 Hb_004357_060 0.31488451 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
10 Hb_010691_010 0.3164535388 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
11 Hb_001269_470 0.3206882514 - - PREDICTED: uncharacterized protein LOC105630313 [Jatropha curcas]
12 Hb_001439_020 0.3289819026 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
13 Hb_000094_050 0.3292690075 - - -
14 Hb_003181_060 0.3324131854 - - PREDICTED: triosephosphate isomerase, cytosolic [Jatropha curcas]
15 Hb_000946_060 0.3342401291 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic-like isoform X2 [Jatropha curcas]
16 Hb_153269_010 0.3355214472 - - hypothetical protein CICLE_v10029937mg [Citrus clementina]
17 Hb_002085_080 0.3364964683 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 68-like [Jatropha curcas]
18 Hb_012239_050 0.3379871747 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003540_100 0.3381509242 - - ATP-binding cassette transporter, putative [Ricinus communis]
20 Hb_000523_110 0.3403354109 - - PREDICTED: probable polyamine oxidase 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000668_130 Hb_000668_130 Hb_003687_220 Hb_003687_220 Hb_000668_130--Hb_003687_220 Hb_177019_010 Hb_177019_010 Hb_000668_130--Hb_177019_010 Hb_011794_100 Hb_011794_100 Hb_000668_130--Hb_011794_100 Hb_000416_030 Hb_000416_030 Hb_000668_130--Hb_000416_030 Hb_001226_190 Hb_001226_190 Hb_000668_130--Hb_001226_190 Hb_002000_120 Hb_002000_120 Hb_000668_130--Hb_002000_120 Hb_170426_010 Hb_170426_010 Hb_003687_220--Hb_170426_010 Hb_005144_190 Hb_005144_190 Hb_003687_220--Hb_005144_190 Hb_008759_020 Hb_008759_020 Hb_003687_220--Hb_008759_020 Hb_002338_030 Hb_002338_030 Hb_003687_220--Hb_002338_030 Hb_001449_100 Hb_001449_100 Hb_003687_220--Hb_001449_100 Hb_004679_060 Hb_004679_060 Hb_003687_220--Hb_004679_060 Hb_004076_040 Hb_004076_040 Hb_177019_010--Hb_004076_040 Hb_000656_050 Hb_000656_050 Hb_177019_010--Hb_000656_050 Hb_004934_120 Hb_004934_120 Hb_177019_010--Hb_004934_120 Hb_007254_030 Hb_007254_030 Hb_177019_010--Hb_007254_030 Hb_002518_100 Hb_002518_100 Hb_177019_010--Hb_002518_100 Hb_001439_020 Hb_001439_020 Hb_011794_100--Hb_001439_020 Hb_003540_100 Hb_003540_100 Hb_011794_100--Hb_003540_100 Hb_002401_020 Hb_002401_020 Hb_011794_100--Hb_002401_020 Hb_006922_070 Hb_006922_070 Hb_011794_100--Hb_006922_070 Hb_000139_270 Hb_000139_270 Hb_011794_100--Hb_000139_270 Hb_012490_020 Hb_012490_020 Hb_000416_030--Hb_012490_020 Hb_000523_110 Hb_000523_110 Hb_000416_030--Hb_000523_110 Hb_000416_030--Hb_007254_030 Hb_000416_030--Hb_003687_220 Hb_000622_080 Hb_000622_080 Hb_000416_030--Hb_000622_080 Hb_000191_080 Hb_000191_080 Hb_000416_030--Hb_000191_080 Hb_003935_010 Hb_003935_010 Hb_001226_190--Hb_003935_010 Hb_002217_290 Hb_002217_290 Hb_001226_190--Hb_002217_290 Hb_000922_210 Hb_000922_210 Hb_001226_190--Hb_000922_210 Hb_001226_190--Hb_002000_120 Hb_001210_100 Hb_001210_100 Hb_001226_190--Hb_001210_100 Hb_001226_190--Hb_006922_070 Hb_006916_180 Hb_006916_180 Hb_002000_120--Hb_006916_180 Hb_000094_050 Hb_000094_050 Hb_002000_120--Hb_000094_050 Hb_003645_050 Hb_003645_050 Hb_002000_120--Hb_003645_050 Hb_010691_010 Hb_010691_010 Hb_002000_120--Hb_010691_010 Hb_002000_120--Hb_001210_100 Hb_002000_120--Hb_002217_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0168035 0.0772176 0.0156716 0.0202507 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.10899 0 0.0437544 0.0747037

CAGE analysis