Hb_000670_030

Information

Type -
Description -
Location Contig670: 43998-45673
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000670_030 0.0 - - -
2 Hb_027428_030 0.2348864338 - - unnamed protein product [Coffea canephora]
3 Hb_030619_010 0.2544812275 - - -
4 Hb_021576_060 0.2568358477 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000373_190 0.260340885 - - -
6 Hb_000275_040 0.2620504024 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
7 Hb_000253_030 0.2661327474 - - hypothetical protein JCGZ_23039 [Jatropha curcas]
8 Hb_060715_010 0.2673254261 - - PREDICTED: notchless protein homolog [Gossypium raimondii]
9 Hb_000173_380 0.2695646261 transcription factor TF Family: FAR1 -
10 Hb_020730_010 0.2704078709 - - hypothetical protein CICLE_v10010243mg, partial [Citrus clementina]
11 Hb_000331_310 0.2730458597 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
12 Hb_009476_140 0.2750082254 transcription factor TF Family: bHLH hypothetical protein RCOM_0838610 [Ricinus communis]
13 Hb_005946_160 0.2811191696 transcription factor TF Family: MBF1 ethylene-responsive transcriptional coactivator [Hevea brasiliensis]
14 Hb_156593_050 0.2816499388 - - PREDICTED: DNA-binding protein RHL1 isoform X1 [Jatropha curcas]
15 Hb_035746_010 0.2847217149 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
16 Hb_002151_090 0.2871537735 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 1-like isoform X2 [Jatropha curcas]
17 Hb_029584_080 0.2892409456 - - serine acetyltransferase [Hevea brasiliensis]
18 Hb_002141_020 0.2903884778 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]
19 Hb_003209_030 0.2911434591 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
20 Hb_012753_020 0.2914440926 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000670_030 Hb_000670_030 Hb_027428_030 Hb_027428_030 Hb_000670_030--Hb_027428_030 Hb_030619_010 Hb_030619_010 Hb_000670_030--Hb_030619_010 Hb_021576_060 Hb_021576_060 Hb_000670_030--Hb_021576_060 Hb_000373_190 Hb_000373_190 Hb_000670_030--Hb_000373_190 Hb_000275_040 Hb_000275_040 Hb_000670_030--Hb_000275_040 Hb_000253_030 Hb_000253_030 Hb_000670_030--Hb_000253_030 Hb_000173_480 Hb_000173_480 Hb_027428_030--Hb_000173_480 Hb_000567_040 Hb_000567_040 Hb_027428_030--Hb_000567_040 Hb_002417_060 Hb_002417_060 Hb_027428_030--Hb_002417_060 Hb_020730_010 Hb_020730_010 Hb_027428_030--Hb_020730_010 Hb_002626_040 Hb_002626_040 Hb_027428_030--Hb_002626_040 Hb_010795_060 Hb_010795_060 Hb_027428_030--Hb_010795_060 Hb_029982_010 Hb_029982_010 Hb_030619_010--Hb_029982_010 Hb_042404_010 Hb_042404_010 Hb_030619_010--Hb_042404_010 Hb_030619_010--Hb_000275_040 Hb_010680_010 Hb_010680_010 Hb_030619_010--Hb_010680_010 Hb_000331_310 Hb_000331_310 Hb_030619_010--Hb_000331_310 Hb_003209_030 Hb_003209_030 Hb_030619_010--Hb_003209_030 Hb_027472_030 Hb_027472_030 Hb_021576_060--Hb_027472_030 Hb_035746_010 Hb_035746_010 Hb_021576_060--Hb_035746_010 Hb_000331_500 Hb_000331_500 Hb_021576_060--Hb_000331_500 Hb_012052_010 Hb_012052_010 Hb_021576_060--Hb_012052_010 Hb_120221_010 Hb_120221_010 Hb_021576_060--Hb_120221_010 Hb_001824_020 Hb_001824_020 Hb_021576_060--Hb_001824_020 Hb_002151_090 Hb_002151_090 Hb_000373_190--Hb_002151_090 Hb_045370_010 Hb_045370_010 Hb_000373_190--Hb_045370_010 Hb_000173_380 Hb_000173_380 Hb_000373_190--Hb_000173_380 Hb_000086_100 Hb_000086_100 Hb_000373_190--Hb_000086_100 Hb_130323_010 Hb_130323_010 Hb_000373_190--Hb_130323_010 Hb_000529_240 Hb_000529_240 Hb_000275_040--Hb_000529_240 Hb_069022_010 Hb_069022_010 Hb_000275_040--Hb_069022_010 Hb_000275_040--Hb_000567_040 Hb_000275_040--Hb_003209_030 Hb_010068_100 Hb_010068_100 Hb_000253_030--Hb_010068_100 Hb_163599_010 Hb_163599_010 Hb_000253_030--Hb_163599_010 Hb_136765_010 Hb_136765_010 Hb_000253_030--Hb_136765_010 Hb_155541_010 Hb_155541_010 Hb_000253_030--Hb_155541_010 Hb_003551_010 Hb_003551_010 Hb_000253_030--Hb_003551_010 Hb_008667_040 Hb_008667_040 Hb_000253_030--Hb_008667_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0386407 0.104642 0 0.0795769 0.147696 0.0877195
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0894398 0.140607 0 0.0287001 0

CAGE analysis