Hb_000671_090

Information

Type -
Description -
Location Contig671: 98721-101063
Sequence    

Annotation

kegg
ID rcu:RCOM_1035800
description Melanoma-associated antigen G1, putative
nr
ID XP_012067881.1
description PREDICTED: melanoma-associated antigen 1 [Jatropha curcas]
swissprot
ID P43363
description Melanoma-associated antigen 10 OS=Homo sapiens GN=MAGEA10 PE=2 SV=2
trembl
ID A0A067L2D0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15795 PE=4 SV=1
Gene Ontology
ID GO:0006261
description melanoma-associated antigen g1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53423: 98715-101095
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000671_090 0.0 - - PREDICTED: melanoma-associated antigen 1 [Jatropha curcas]
2 Hb_000009_160 0.0608461115 - - RUB1 conjugating enzyme 1 isoform 2 [Theobroma cacao]
3 Hb_007479_020 0.063128248 - - PREDICTED: CMP-sialic acid transporter 5 [Jatropha curcas]
4 Hb_158467_010 0.0688495609 - - transporter, putative [Ricinus communis]
5 Hb_000979_230 0.0702462203 - - PREDICTED: protein BCCIP homolog [Jatropha curcas]
6 Hb_000270_370 0.0739318135 - - Uncharacterized protein TCM_011954 [Theobroma cacao]
7 Hb_000834_270 0.0748502292 - - PREDICTED: uncharacterized protein LOC105647032 isoform X2 [Jatropha curcas]
8 Hb_004586_320 0.0751396429 - - PREDICTED: bet1-like protein At4g14600 [Jatropha curcas]
9 Hb_000239_010 0.0777506411 - - WD-repeat protein, putative [Ricinus communis]
10 Hb_001998_050 0.0787117507 - - PREDICTED: alpha N-terminal protein methyltransferase 1 [Jatropha curcas]
11 Hb_004837_140 0.0797666255 - - hypothetical protein PRUPE_ppa012469mg [Prunus persica]
12 Hb_003226_280 0.0813217737 - - PREDICTED: peter Pan-like protein [Populus euphratica]
13 Hb_000574_480 0.082089488 - - PREDICTED: uncharacterized protein LOC105634837 [Jatropha curcas]
14 Hb_012675_060 0.0821579106 - - hypothetical protein PRUPE_ppa007715mg [Prunus persica]
15 Hb_008878_030 0.0831193225 - - PREDICTED: uncharacterized protein At1g10890-like [Musa acuminata subsp. malaccensis]
16 Hb_003207_190 0.0834483982 - - PREDICTED: UDP-galactose/UDP-glucose transporter 2 [Populus euphratica]
17 Hb_002963_010 0.0835559441 - - PREDICTED: autophagy-related protein 18b-like isoform X1 [Jatropha curcas]
18 Hb_000205_270 0.0837061371 - - PREDICTED: uncharacterized protein LOC105632722 isoform X1 [Jatropha curcas]
19 Hb_000010_460 0.0841583348 - - hypothetical protein EUGRSUZ_B001502, partial [Eucalyptus grandis]
20 Hb_007943_090 0.0843059358 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000671_090 Hb_000671_090 Hb_000009_160 Hb_000009_160 Hb_000671_090--Hb_000009_160 Hb_007479_020 Hb_007479_020 Hb_000671_090--Hb_007479_020 Hb_158467_010 Hb_158467_010 Hb_000671_090--Hb_158467_010 Hb_000979_230 Hb_000979_230 Hb_000671_090--Hb_000979_230 Hb_000270_370 Hb_000270_370 Hb_000671_090--Hb_000270_370 Hb_000834_270 Hb_000834_270 Hb_000671_090--Hb_000834_270 Hb_007943_090 Hb_007943_090 Hb_000009_160--Hb_007943_090 Hb_000205_270 Hb_000205_270 Hb_000009_160--Hb_000205_270 Hb_005431_010 Hb_005431_010 Hb_000009_160--Hb_005431_010 Hb_016065_010 Hb_016065_010 Hb_000009_160--Hb_016065_010 Hb_055062_030 Hb_055062_030 Hb_000009_160--Hb_055062_030 Hb_001722_100 Hb_001722_100 Hb_007479_020--Hb_001722_100 Hb_001383_060 Hb_001383_060 Hb_007479_020--Hb_001383_060 Hb_001433_050 Hb_001433_050 Hb_007479_020--Hb_001433_050 Hb_000120_750 Hb_000120_750 Hb_007479_020--Hb_000120_750 Hb_008173_090 Hb_008173_090 Hb_007479_020--Hb_008173_090 Hb_032264_110 Hb_032264_110 Hb_158467_010--Hb_032264_110 Hb_012053_070 Hb_012053_070 Hb_158467_010--Hb_012053_070 Hb_065525_020 Hb_065525_020 Hb_158467_010--Hb_065525_020 Hb_000638_250 Hb_000638_250 Hb_158467_010--Hb_000638_250 Hb_009773_020 Hb_009773_020 Hb_158467_010--Hb_009773_020 Hb_000239_010 Hb_000239_010 Hb_000979_230--Hb_000239_010 Hb_000979_230--Hb_000270_370 Hb_001691_210 Hb_001691_210 Hb_000979_230--Hb_001691_210 Hb_001109_020 Hb_001109_020 Hb_000979_230--Hb_001109_020 Hb_009666_040 Hb_009666_040 Hb_000979_230--Hb_009666_040 Hb_027073_040 Hb_027073_040 Hb_000270_370--Hb_027073_040 Hb_000221_160 Hb_000221_160 Hb_000270_370--Hb_000221_160 Hb_000373_120 Hb_000373_120 Hb_000270_370--Hb_000373_120 Hb_033834_040 Hb_033834_040 Hb_000270_370--Hb_033834_040 Hb_000146_020 Hb_000146_020 Hb_000834_270--Hb_000146_020 Hb_002963_010 Hb_002963_010 Hb_000834_270--Hb_002963_010 Hb_012675_060 Hb_012675_060 Hb_000834_270--Hb_012675_060 Hb_010080_090 Hb_010080_090 Hb_000834_270--Hb_010080_090 Hb_002918_200 Hb_002918_200 Hb_000834_270--Hb_002918_200 Hb_000834_270--Hb_001722_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.4547 2.56896 3.90847 4.48917 6.59855 7.63798
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.1718 14.2726 12.4298 6.54915 1.96424

CAGE analysis