Hb_000672_030

Information

Type -
Description -
Location Contig672: 29239-29838
Sequence    

Annotation

kegg
ID rcu:RCOM_0809450
description hypothetical protein
nr
ID XP_012065813.1
description PREDICTED: uncharacterized protein LOC105628931 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4J1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24238 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53473: 25726-30340
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000672_030 0.0 - - PREDICTED: uncharacterized protein LOC105628931 isoform X1 [Jatropha curcas]
2 Hb_001860_020 0.0909830361 - - PREDICTED: transmembrane protein 64 [Jatropha curcas]
3 Hb_001225_030 0.1000678083 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 1 [Jatropha curcas]
4 Hb_030116_010 0.1085064337 - - F-box protein, atfbl3, putative [Ricinus communis]
5 Hb_001247_120 0.1105396004 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 3 [Jatropha curcas]
6 Hb_003175_030 0.1121026386 - - PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Populus euphratica]
7 Hb_003682_030 0.1165654307 - - hypothetical protein CICLE_v10020876mg [Citrus clementina]
8 Hb_116086_010 0.1198717748 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
9 Hb_004371_010 0.1200047283 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1b(c38)-like isoform X3 [Jatropha curcas]
10 Hb_001864_060 0.1212817067 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
11 Hb_003117_020 0.1229492147 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE6 [Jatropha curcas]
12 Hb_009028_010 0.1231343433 - - PREDICTED: probable disease resistance protein At1g12280 [Jatropha curcas]
13 Hb_002078_220 0.1248122465 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X1 [Jatropha curcas]
14 Hb_001828_130 0.1248994015 - - PREDICTED: transcription factor GTE8-like [Jatropha curcas]
15 Hb_000886_050 0.1270218696 - - hypothetical protein POPTR_0003s01110g [Populus trichocarpa]
16 Hb_000363_370 0.1274704792 - - PREDICTED: putative BPI/LBP family protein At1g04970 [Jatropha curcas]
17 Hb_002005_110 0.1276591662 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X5 [Jatropha curcas]
18 Hb_003142_030 0.1277837194 - - PREDICTED: probable plastid-lipid-associated protein 14, chloroplastic [Jatropha curcas]
19 Hb_000861_080 0.1280455158 - - PREDICTED: protein ELC-like [Jatropha curcas]
20 Hb_000069_130 0.1283131083 - - PREDICTED: uncharacterized protein LOC105642829 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000672_030 Hb_000672_030 Hb_001860_020 Hb_001860_020 Hb_000672_030--Hb_001860_020 Hb_001225_030 Hb_001225_030 Hb_000672_030--Hb_001225_030 Hb_030116_010 Hb_030116_010 Hb_000672_030--Hb_030116_010 Hb_001247_120 Hb_001247_120 Hb_000672_030--Hb_001247_120 Hb_003175_030 Hb_003175_030 Hb_000672_030--Hb_003175_030 Hb_003682_030 Hb_003682_030 Hb_000672_030--Hb_003682_030 Hb_001860_020--Hb_001247_120 Hb_001189_130 Hb_001189_130 Hb_001860_020--Hb_001189_130 Hb_046117_010 Hb_046117_010 Hb_001860_020--Hb_046117_010 Hb_001348_150 Hb_001348_150 Hb_001860_020--Hb_001348_150 Hb_000540_120 Hb_000540_120 Hb_001860_020--Hb_000540_120 Hb_001225_030--Hb_003682_030 Hb_000375_290 Hb_000375_290 Hb_001225_030--Hb_000375_290 Hb_000645_170 Hb_000645_170 Hb_001225_030--Hb_000645_170 Hb_004870_050 Hb_004870_050 Hb_001225_030--Hb_004870_050 Hb_000094_090 Hb_000094_090 Hb_001225_030--Hb_000094_090 Hb_001754_030 Hb_001754_030 Hb_001225_030--Hb_001754_030 Hb_009393_180 Hb_009393_180 Hb_030116_010--Hb_009393_180 Hb_000134_340 Hb_000134_340 Hb_030116_010--Hb_000134_340 Hb_009545_090 Hb_009545_090 Hb_030116_010--Hb_009545_090 Hb_000363_370 Hb_000363_370 Hb_030116_010--Hb_000363_370 Hb_000608_280 Hb_000608_280 Hb_030116_010--Hb_000608_280 Hb_005551_060 Hb_005551_060 Hb_001247_120--Hb_005551_060 Hb_001247_120--Hb_001348_150 Hb_001864_060 Hb_001864_060 Hb_001247_120--Hb_001864_060 Hb_000025_330 Hb_000025_330 Hb_001247_120--Hb_000025_330 Hb_010381_030 Hb_010381_030 Hb_003175_030--Hb_010381_030 Hb_000886_050 Hb_000886_050 Hb_003175_030--Hb_000886_050 Hb_005389_160 Hb_005389_160 Hb_003175_030--Hb_005389_160 Hb_002078_220 Hb_002078_220 Hb_003175_030--Hb_002078_220 Hb_003752_100 Hb_003752_100 Hb_003175_030--Hb_003752_100 Hb_003398_080 Hb_003398_080 Hb_003175_030--Hb_003398_080 Hb_008695_090 Hb_008695_090 Hb_003682_030--Hb_008695_090 Hb_000723_110 Hb_000723_110 Hb_003682_030--Hb_000723_110 Hb_005306_160 Hb_005306_160 Hb_003682_030--Hb_005306_160 Hb_003682_030--Hb_004870_050 Hb_003682_030--Hb_000094_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.01066 16.6223 6.16085 5.13776 5.18086 7.61669
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.11672 5.77827 3.36489 2.96395 3.71782

CAGE analysis