Hb_000684_080

Information

Type -
Description -
Location Contig684: 156827-158974
Sequence    

Annotation

kegg
ID cit:102612879
description L-type lectin-domain containing receptor kinase VIII.1-like
nr
ID XP_012082318.1
description PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
swissprot
ID Q9LFH9
description L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana GN=LECRK81 PE=2 SV=1
trembl
ID A0A067K9X6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16484 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53965: 156372-156651
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000684_080 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
2 Hb_016347_020 0.0744691623 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like isoform X1 [Populus euphratica]
3 Hb_121089_030 0.0814503749 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
4 Hb_000317_510 0.0845257338 - - PREDICTED: long chain base biosynthesis protein 1 [Jatropha curcas]
5 Hb_000373_080 0.0854215076 - - PREDICTED: serine decarboxylase [Jatropha curcas]
6 Hb_030736_060 0.090800985 - - PREDICTED: lysM domain-containing GPI-anchored protein 1 [Jatropha curcas]
7 Hb_002784_030 0.0929049053 - - hypothetical protein POPTR_0001s06740g [Populus trichocarpa]
8 Hb_007800_020 0.0934615925 - - PREDICTED: probable arabinosyltransferase ARAD1 isoform X1 [Jatropha curcas]
9 Hb_159809_030 0.0943667951 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 2-like isoform X2 [Jatropha curcas]
10 Hb_002326_110 0.0979231459 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
11 Hb_001257_030 0.0996955401 - - PREDICTED: serine/threonine-protein kinase Nek5 [Jatropha curcas]
12 Hb_000261_210 0.0997412876 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
13 Hb_000017_230 0.1000840661 - - hypothetical protein JCGZ_20558 [Jatropha curcas]
14 Hb_001002_060 0.1002361819 - - PREDICTED: putative GPI-anchor transamidase [Jatropha curcas]
15 Hb_004096_060 0.1036997179 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
16 Hb_005723_020 0.1045038258 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005895_010 0.1048015461 - - PREDICTED: uncharacterized protein LOC105643387 isoform X1 [Jatropha curcas]
18 Hb_002478_030 0.1059024733 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 1-like [Jatropha curcas]
19 Hb_000362_170 0.1060230999 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
20 Hb_030982_010 0.106039303 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000684_080 Hb_000684_080 Hb_016347_020 Hb_016347_020 Hb_000684_080--Hb_016347_020 Hb_121089_030 Hb_121089_030 Hb_000684_080--Hb_121089_030 Hb_000317_510 Hb_000317_510 Hb_000684_080--Hb_000317_510 Hb_000373_080 Hb_000373_080 Hb_000684_080--Hb_000373_080 Hb_030736_060 Hb_030736_060 Hb_000684_080--Hb_030736_060 Hb_002784_030 Hb_002784_030 Hb_000684_080--Hb_002784_030 Hb_000963_040 Hb_000963_040 Hb_016347_020--Hb_000963_040 Hb_000330_060 Hb_000330_060 Hb_016347_020--Hb_000330_060 Hb_001002_060 Hb_001002_060 Hb_016347_020--Hb_001002_060 Hb_004096_060 Hb_004096_060 Hb_016347_020--Hb_004096_060 Hb_003119_090 Hb_003119_090 Hb_016347_020--Hb_003119_090 Hb_000017_230 Hb_000017_230 Hb_121089_030--Hb_000017_230 Hb_030982_010 Hb_030982_010 Hb_121089_030--Hb_030982_010 Hb_021165_010 Hb_021165_010 Hb_121089_030--Hb_021165_010 Hb_000320_290 Hb_000320_290 Hb_121089_030--Hb_000320_290 Hb_001552_030 Hb_001552_030 Hb_121089_030--Hb_001552_030 Hb_010042_030 Hb_010042_030 Hb_121089_030--Hb_010042_030 Hb_103747_020 Hb_103747_020 Hb_000317_510--Hb_103747_020 Hb_000317_510--Hb_000373_080 Hb_002326_110 Hb_002326_110 Hb_000317_510--Hb_002326_110 Hb_000362_170 Hb_000362_170 Hb_000317_510--Hb_000362_170 Hb_001005_030 Hb_001005_030 Hb_000317_510--Hb_001005_030 Hb_002054_050 Hb_002054_050 Hb_000317_510--Hb_002054_050 Hb_003186_020 Hb_003186_020 Hb_000373_080--Hb_003186_020 Hb_001377_310 Hb_001377_310 Hb_000373_080--Hb_001377_310 Hb_000373_080--Hb_001005_030 Hb_000214_050 Hb_000214_050 Hb_000373_080--Hb_000214_050 Hb_000373_080--Hb_000362_170 Hb_030736_060--Hb_016347_020 Hb_030736_060--Hb_121089_030 Hb_030736_060--Hb_000963_040 Hb_000261_210 Hb_000261_210 Hb_030736_060--Hb_000261_210 Hb_001227_130 Hb_001227_130 Hb_030736_060--Hb_001227_130 Hb_000640_070 Hb_000640_070 Hb_002784_030--Hb_000640_070 Hb_002784_030--Hb_001552_030 Hb_012215_010 Hb_012215_010 Hb_002784_030--Hb_012215_010 Hb_008397_010 Hb_008397_010 Hb_002784_030--Hb_008397_010 Hb_002475_040 Hb_002475_040 Hb_002784_030--Hb_002475_040 Hb_073973_150 Hb_073973_150 Hb_002784_030--Hb_073973_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.54511 3.6458 6.60668 6.19002 3.4252 3.97908
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.83535 1.09952 3.33599 3.75168 3.37093

CAGE analysis