Hb_000684_170

Information

Type -
Description -
Location Contig684: 206840-207913
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000684_170 0.0 - - -
2 Hb_001501_050 0.035267203 - - Wall associated kinase-like 6, putative [Theobroma cacao]
3 Hb_001218_080 0.1917362446 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
4 Hb_113388_010 0.2303545481 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000896_140 0.234922159 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
6 Hb_007040_030 0.2349315049 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
7 Hb_000926_170 0.2351264788 - - conserved hypothetical protein [Ricinus communis]
8 Hb_119789_010 0.2355605482 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
9 Hb_156055_020 0.2363643156 - - conserved hypothetical protein [Ricinus communis]
10 Hb_007292_030 0.2369733789 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004899_160 0.2373168152 - - -
12 Hb_156850_110 0.2375579631 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
13 Hb_000002_130 0.2406247661 - - PREDICTED: early nodulin-75-like [Jatropha curcas]
14 Hb_021409_060 0.2410381732 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
15 Hb_168436_010 0.2421022468 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
16 Hb_002127_010 0.2442307527 - - Aluminum activated malate transporter family protein, putative [Theobroma cacao]
17 Hb_001268_360 0.246792433 - - PREDICTED: uncharacterized protein LOC104447679 [Eucalyptus grandis]
18 Hb_110562_020 0.2484052467 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
19 Hb_010896_010 0.248969665 - - -
20 Hb_067197_020 0.2527174542 - - -

Gene co-expression network

sample Hb_000684_170 Hb_000684_170 Hb_001501_050 Hb_001501_050 Hb_000684_170--Hb_001501_050 Hb_001218_080 Hb_001218_080 Hb_000684_170--Hb_001218_080 Hb_113388_010 Hb_113388_010 Hb_000684_170--Hb_113388_010 Hb_000896_140 Hb_000896_140 Hb_000684_170--Hb_000896_140 Hb_007040_030 Hb_007040_030 Hb_000684_170--Hb_007040_030 Hb_000926_170 Hb_000926_170 Hb_000684_170--Hb_000926_170 Hb_001501_050--Hb_001218_080 Hb_156850_110 Hb_156850_110 Hb_001501_050--Hb_156850_110 Hb_007292_030 Hb_007292_030 Hb_001501_050--Hb_007292_030 Hb_001501_050--Hb_113388_010 Hb_003849_230 Hb_003849_230 Hb_001501_050--Hb_003849_230 Hb_001218_080--Hb_156850_110 Hb_172632_020 Hb_172632_020 Hb_001218_080--Hb_172632_020 Hb_000270_850 Hb_000270_850 Hb_001218_080--Hb_000270_850 Hb_084611_010 Hb_084611_010 Hb_001218_080--Hb_084611_010 Hb_089032_060 Hb_089032_060 Hb_113388_010--Hb_089032_060 Hb_032299_030 Hb_032299_030 Hb_113388_010--Hb_032299_030 Hb_000380_070 Hb_000380_070 Hb_113388_010--Hb_000380_070 Hb_113388_010--Hb_007292_030 Hb_004352_020 Hb_004352_020 Hb_113388_010--Hb_004352_020 Hb_113388_010--Hb_003849_230 Hb_000896_140--Hb_007040_030 Hb_000896_140--Hb_000926_170 Hb_119789_010 Hb_119789_010 Hb_000896_140--Hb_119789_010 Hb_156055_020 Hb_156055_020 Hb_000896_140--Hb_156055_020 Hb_004899_160 Hb_004899_160 Hb_000896_140--Hb_004899_160 Hb_000002_130 Hb_000002_130 Hb_000896_140--Hb_000002_130 Hb_007040_030--Hb_000926_170 Hb_007040_030--Hb_119789_010 Hb_007040_030--Hb_156055_020 Hb_007040_030--Hb_004899_160 Hb_007040_030--Hb_000002_130 Hb_000926_170--Hb_119789_010 Hb_000926_170--Hb_156055_020 Hb_000926_170--Hb_000002_130 Hb_000926_170--Hb_004899_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.444825 0.0544754 0 0 0.0592429
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis