Hb_000684_210

Information

Type -
Description -
Location Contig684: 230770-234616
Sequence    

Annotation

kegg
ID pop:POPTR_0006s13350g
description hydrolase family protein
nr
ID XP_012082295.1
description PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1Y5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16467 PE=4 SV=1
Gene Ontology
ID GO:0016787
description hydrolase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53985: 230929-234554
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000684_210 0.0 - - PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
2 Hb_000645_280 0.0751959554 - - PREDICTED: AMSH-like ubiquitin thioesterase 3 [Jatropha curcas]
3 Hb_000359_210 0.0764505549 - - conserved hypothetical protein [Ricinus communis]
4 Hb_170138_010 0.0803626968 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001662_100 0.0839566582 - - PREDICTED: serine/threonine-protein kinase EDR1-like [Jatropha curcas]
6 Hb_003106_190 0.0844775117 - - Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis]
7 Hb_009569_040 0.0862603739 - - PREDICTED: uncharacterized protein LOC105635573 [Jatropha curcas]
8 Hb_003206_110 0.0866627422 - - Putative 1-aminocyclopropane-1-carboxylate deaminase [Gossypium arboreum]
9 Hb_109000_020 0.0898083192 - - PREDICTED: uncharacterized protein LOC105633730 [Jatropha curcas]
10 Hb_000365_400 0.0901060831 - - metal ion transporter, putative [Ricinus communis]
11 Hb_002232_390 0.0904512309 - - PREDICTED: uncharacterized protein LOC105635994 [Jatropha curcas]
12 Hb_005800_030 0.0908352956 - - PREDICTED: lysM and putative peptidoglycan-binding domain-containing protein 4-like [Jatropha curcas]
13 Hb_000409_030 0.0912284614 - - PREDICTED: uncharacterized protein LOC105642693 [Jatropha curcas]
14 Hb_000014_040 0.0937583727 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003086_170 0.0941704646 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Jatropha curcas]
16 Hb_002928_090 0.0951876693 - - PREDICTED: metallocarboxypeptidase A-like protein TRV_02598 [Jatropha curcas]
17 Hb_003878_150 0.0954425849 - - PREDICTED: GPI mannosyltransferase 3 [Jatropha curcas]
18 Hb_002897_090 0.0954504646 - - conserved hypothetical protein [Ricinus communis]
19 Hb_015934_120 0.0957632457 - - PREDICTED: callose synthase 7 [Vitis vinifera]
20 Hb_003544_160 0.0961961931 - - -

Gene co-expression network

sample Hb_000684_210 Hb_000684_210 Hb_000645_280 Hb_000645_280 Hb_000684_210--Hb_000645_280 Hb_000359_210 Hb_000359_210 Hb_000684_210--Hb_000359_210 Hb_170138_010 Hb_170138_010 Hb_000684_210--Hb_170138_010 Hb_001662_100 Hb_001662_100 Hb_000684_210--Hb_001662_100 Hb_003106_190 Hb_003106_190 Hb_000684_210--Hb_003106_190 Hb_009569_040 Hb_009569_040 Hb_000684_210--Hb_009569_040 Hb_028487_070 Hb_028487_070 Hb_000645_280--Hb_028487_070 Hb_002232_390 Hb_002232_390 Hb_000645_280--Hb_002232_390 Hb_001051_050 Hb_001051_050 Hb_000645_280--Hb_001051_050 Hb_001347_060 Hb_001347_060 Hb_000645_280--Hb_001347_060 Hb_005800_030 Hb_005800_030 Hb_000645_280--Hb_005800_030 Hb_002897_090 Hb_002897_090 Hb_000359_210--Hb_002897_090 Hb_002027_080 Hb_002027_080 Hb_000359_210--Hb_002027_080 Hb_001195_400 Hb_001195_400 Hb_000359_210--Hb_001195_400 Hb_002874_110 Hb_002874_110 Hb_000359_210--Hb_002874_110 Hb_004679_030 Hb_004679_030 Hb_000359_210--Hb_004679_030 Hb_003206_110 Hb_003206_110 Hb_000359_210--Hb_003206_110 Hb_170138_010--Hb_003206_110 Hb_170138_010--Hb_001195_400 Hb_000185_220 Hb_000185_220 Hb_170138_010--Hb_000185_220 Hb_004046_030 Hb_004046_030 Hb_170138_010--Hb_004046_030 Hb_170138_010--Hb_000359_210 Hb_002414_050 Hb_002414_050 Hb_001662_100--Hb_002414_050 Hb_001662_100--Hb_009569_040 Hb_002883_030 Hb_002883_030 Hb_001662_100--Hb_002883_030 Hb_003544_160 Hb_003544_160 Hb_001662_100--Hb_003544_160 Hb_000787_160 Hb_000787_160 Hb_001662_100--Hb_000787_160 Hb_003878_150 Hb_003878_150 Hb_001662_100--Hb_003878_150 Hb_002811_010 Hb_002811_010 Hb_003106_190--Hb_002811_010 Hb_000613_110 Hb_000613_110 Hb_003106_190--Hb_000613_110 Hb_003106_190--Hb_000359_210 Hb_003994_110 Hb_003994_110 Hb_003106_190--Hb_003994_110 Hb_000077_150 Hb_000077_150 Hb_003106_190--Hb_000077_150 Hb_000256_150 Hb_000256_150 Hb_009569_040--Hb_000256_150 Hb_005725_130 Hb_005725_130 Hb_009569_040--Hb_005725_130 Hb_000049_020 Hb_000049_020 Hb_009569_040--Hb_000049_020 Hb_007481_010 Hb_007481_010 Hb_009569_040--Hb_007481_010 Hb_009569_040--Hb_002414_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.57315 3.75652 4.19196 10.5425 5.10325 5.01678
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.61372 5.79063 4.53369 5.86848 12.2386

CAGE analysis