Hb_000685_140

Information

Type -
Description -
Location Contig685: 193774-194199
Sequence    

Annotation

kegg
ID rcu:RCOM_1692070
description hypothetical protein
nr
ID XP_012086718.1
description PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZ74
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20451 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000685_140 0.0 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
2 Hb_000101_320 0.0609314975 - - -
3 Hb_001411_100 0.0756275334 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
4 Hb_028872_100 0.0807673535 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
5 Hb_001452_090 0.0842105305 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
6 Hb_000600_080 0.0913630933 - - -
7 Hb_008834_010 0.1159142649 - - hypothetical protein POPTR_0016s04660g [Populus trichocarpa]
8 Hb_031949_010 0.1241446071 - - -
9 Hb_000417_150 0.1298860921 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
10 Hb_000009_390 0.1361575236 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
11 Hb_072173_010 0.1378093884 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
12 Hb_005470_040 0.1385025907 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
13 Hb_109489_010 0.1600956616 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
14 Hb_067345_020 0.1647546292 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
15 Hb_004312_020 0.1660557384 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001355_060 0.1682609147 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
17 Hb_005306_020 0.1685928485 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
18 Hb_000061_110 0.1701465269 - - -
19 Hb_001514_150 0.170238786 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
20 Hb_001866_100 0.1712308428 - - PREDICTED: uncharacterized protein LOC104212668 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000685_140 Hb_000685_140 Hb_000101_320 Hb_000101_320 Hb_000685_140--Hb_000101_320 Hb_001411_100 Hb_001411_100 Hb_000685_140--Hb_001411_100 Hb_028872_100 Hb_028872_100 Hb_000685_140--Hb_028872_100 Hb_001452_090 Hb_001452_090 Hb_000685_140--Hb_001452_090 Hb_000600_080 Hb_000600_080 Hb_000685_140--Hb_000600_080 Hb_008834_010 Hb_008834_010 Hb_000685_140--Hb_008834_010 Hb_000101_320--Hb_001452_090 Hb_000101_320--Hb_008834_010 Hb_000101_320--Hb_001411_100 Hb_000101_320--Hb_028872_100 Hb_000009_390 Hb_000009_390 Hb_000101_320--Hb_000009_390 Hb_001411_100--Hb_000600_080 Hb_001411_100--Hb_028872_100 Hb_001411_100--Hb_001452_090 Hb_000417_150 Hb_000417_150 Hb_001411_100--Hb_000417_150 Hb_000767_010 Hb_000767_010 Hb_028872_100--Hb_000767_010 Hb_028872_100--Hb_000417_150 Hb_005306_020 Hb_005306_020 Hb_028872_100--Hb_005306_020 Hb_001452_090--Hb_028872_100 Hb_001452_090--Hb_000009_390 Hb_001452_090--Hb_008834_010 Hb_072173_010 Hb_072173_010 Hb_000600_080--Hb_072173_010 Hb_000600_080--Hb_000101_320 Hb_031949_010 Hb_031949_010 Hb_000600_080--Hb_031949_010 Hb_000959_370 Hb_000959_370 Hb_000600_080--Hb_000959_370 Hb_017225_030 Hb_017225_030 Hb_008834_010--Hb_017225_030 Hb_004312_020 Hb_004312_020 Hb_008834_010--Hb_004312_020 Hb_000260_730 Hb_000260_730 Hb_008834_010--Hb_000260_730
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.381547 0.0585053 0.123287 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.353719 0.748341

CAGE analysis