Hb_000690_150

Information

Type -
Description -
Location Contig690: 219361-222954
Sequence    

Annotation

kegg
ID sly:101263965
description uncharacterized transporter C5D6.04-like
nr
ID XP_012065419.1
description PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LGV7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22412 PE=4 SV=1
Gene Ontology
ID GO:0016021
description uncharacterized transporter ybr287w

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000690_150 0.0 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
2 Hb_007423_050 0.1021385833 - - PREDICTED: cysteine-rich receptor-like protein kinase 3 [Jatropha curcas]
3 Hb_000796_240 0.127653677 - - -
4 Hb_000008_420 0.128459722 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
5 Hb_011671_270 0.1289513202 - - phosphofructokinase [Hevea brasiliensis]
6 Hb_028960_030 0.1324537262 - - Short-chain dehydrogenase-reductase B [Theobroma cacao]
7 Hb_005215_020 0.1326477374 transcription factor TF Family: MYB PREDICTED: transcription factor MYB44 [Jatropha curcas]
8 Hb_001892_030 0.1343800573 - - PREDICTED: phytanoyl-CoA dioxygenase isoform X1 [Jatropha curcas]
9 Hb_000210_250 0.1354370514 - - PREDICTED: testis-expressed sequence 10 protein isoform X1 [Jatropha curcas]
10 Hb_025336_020 0.1366816871 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
11 Hb_172426_030 0.1392744524 - - acetylglucosaminyltransferase, putative [Ricinus communis]
12 Hb_006210_010 0.1402663188 - - PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Jatropha curcas]
13 Hb_000270_170 0.1408005803 - - PREDICTED: formin-like protein 5 [Jatropha curcas]
14 Hb_001300_280 0.1416209279 - - PREDICTED: mitochondrial substrate carrier family protein ucpB [Jatropha curcas]
15 Hb_089140_040 0.1431912451 - - PREDICTED: uncharacterized protein LOC105637966 [Jatropha curcas]
16 Hb_000617_190 0.1433902109 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase [Jatropha curcas]
17 Hb_000960_080 0.1434059939 - - PREDICTED: topless-related protein 1-like isoform X2 [Jatropha curcas]
18 Hb_001008_130 0.1434634252 transcription factor TF Family: mTERF PREDICTED: cytochrome c1-2, heme protein, mitochondrial-like [Elaeis guineensis]
19 Hb_000787_200 0.1435022096 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_012239_070 0.1436845139 - - PREDICTED: uncharacterized protein LOC105634113 [Jatropha curcas]

Gene co-expression network

sample Hb_000690_150 Hb_000690_150 Hb_007423_050 Hb_007423_050 Hb_000690_150--Hb_007423_050 Hb_000796_240 Hb_000796_240 Hb_000690_150--Hb_000796_240 Hb_000008_420 Hb_000008_420 Hb_000690_150--Hb_000008_420 Hb_011671_270 Hb_011671_270 Hb_000690_150--Hb_011671_270 Hb_028960_030 Hb_028960_030 Hb_000690_150--Hb_028960_030 Hb_005215_020 Hb_005215_020 Hb_000690_150--Hb_005215_020 Hb_025336_020 Hb_025336_020 Hb_007423_050--Hb_025336_020 Hb_007423_050--Hb_000008_420 Hb_007423_050--Hb_011671_270 Hb_006637_070 Hb_006637_070 Hb_007423_050--Hb_006637_070 Hb_000088_270 Hb_000088_270 Hb_007423_050--Hb_000088_270 Hb_000796_240--Hb_000008_420 Hb_012539_110 Hb_012539_110 Hb_000796_240--Hb_012539_110 Hb_000796_240--Hb_000088_270 Hb_089140_040 Hb_089140_040 Hb_000796_240--Hb_089140_040 Hb_000796_240--Hb_007423_050 Hb_006588_060 Hb_006588_060 Hb_000796_240--Hb_006588_060 Hb_000008_420--Hb_000088_270 Hb_000008_420--Hb_006588_060 Hb_012092_050 Hb_012092_050 Hb_000008_420--Hb_012092_050 Hb_007257_060 Hb_007257_060 Hb_000008_420--Hb_007257_060 Hb_000920_300 Hb_000920_300 Hb_000008_420--Hb_000920_300 Hb_000565_040 Hb_000565_040 Hb_011671_270--Hb_000565_040 Hb_000510_340 Hb_000510_340 Hb_011671_270--Hb_000510_340 Hb_011671_270--Hb_028960_030 Hb_003528_050 Hb_003528_050 Hb_011671_270--Hb_003528_050 Hb_000352_310 Hb_000352_310 Hb_011671_270--Hb_000352_310 Hb_011224_160 Hb_011224_160 Hb_011671_270--Hb_011224_160 Hb_028960_030--Hb_011224_160 Hb_003683_010 Hb_003683_010 Hb_028960_030--Hb_003683_010 Hb_000979_220 Hb_000979_220 Hb_028960_030--Hb_000979_220 Hb_011674_040 Hb_011674_040 Hb_028960_030--Hb_011674_040 Hb_021576_010 Hb_021576_010 Hb_028960_030--Hb_021576_010 Hb_006006_040 Hb_006006_040 Hb_005215_020--Hb_006006_040 Hb_000085_450 Hb_000085_450 Hb_005215_020--Hb_000085_450 Hb_000089_180 Hb_000089_180 Hb_005215_020--Hb_000089_180 Hb_007839_020 Hb_007839_020 Hb_005215_020--Hb_007839_020 Hb_000656_150 Hb_000656_150 Hb_005215_020--Hb_000656_150 Hb_001328_080 Hb_001328_080 Hb_005215_020--Hb_001328_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.339008 0.467063 0.332265 0.340104 0.129813 0.0703621
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.24404 0.239884 0.0873653 0.484266 0.388034

CAGE analysis