Hb_000692_010

Information

Type -
Description -
Location Contig692: 30877-33639
Sequence    

Annotation

kegg
ID pop:POPTR_0005s26580g
description POPTRDRAFT_715538; hypothetical protein
nr
ID XP_012073731.1
description PREDICTED: uncharacterized protein LOC105635295 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KX77
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08171 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000692_010 0.0 - - PREDICTED: uncharacterized protein LOC105635295 [Jatropha curcas]
2 Hb_000836_140 0.1559806703 - - PREDICTED: protein TIC 20-IV, chloroplastic [Jatropha curcas]
3 Hb_004128_110 0.1632898879 - - glutathione S-transferase L3-like [Jatropha curcas]
4 Hb_000506_120 0.1672068494 - - hypothetical protein AALP_AA6G154200 [Arabis alpina]
5 Hb_007432_020 0.168440031 - - hypothetical protein POPTR_0010s13310g [Populus trichocarpa]
6 Hb_000031_260 0.1721560337 - - hypothetical protein POPTR_0018s03360g [Populus trichocarpa]
7 Hb_004931_100 0.1733996495 - - Actin depolymerizing factor 6 isoform 1 [Theobroma cacao]
8 Hb_104265_040 0.1746798239 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001387_020 0.178453037 - - PREDICTED: uncharacterized protein LOC102587892 [Solanum tuberosum]
10 Hb_008699_020 0.1810797115 - - eukaryotic translation initiation factor 5A isoform IV [Hevea brasiliensis]
11 Hb_005307_050 0.1817055457 - - PREDICTED: uncharacterized protein LOC105645274 [Jatropha curcas]
12 Hb_001288_030 0.1836101218 - - -
13 Hb_000096_130 0.184340776 - - hypothetical protein 23 [Hevea brasiliensis]
14 Hb_013839_010 0.1852740365 - - Angio-associated migratory cell protein, putative [Ricinus communis]
15 Hb_001054_100 0.1865668105 - - PREDICTED: uncharacterized protein LOC105634642 [Jatropha curcas]
16 Hb_000590_100 0.188409104 - - -
17 Hb_000030_200 0.1905662599 - - PREDICTED: early nodulin-93-like [Populus euphratica]
18 Hb_000329_250 0.1906977662 - - PREDICTED: vesicle-associated protein 1-3 isoform X1 [Fragaria vesca subsp. vesca]
19 Hb_153544_010 0.1907045698 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
20 Hb_010815_030 0.1921116034 - - PREDICTED: (-)-germacrene D synthase [Vitis vinifera]

Gene co-expression network

sample Hb_000692_010 Hb_000692_010 Hb_000836_140 Hb_000836_140 Hb_000692_010--Hb_000836_140 Hb_004128_110 Hb_004128_110 Hb_000692_010--Hb_004128_110 Hb_000506_120 Hb_000506_120 Hb_000692_010--Hb_000506_120 Hb_007432_020 Hb_007432_020 Hb_000692_010--Hb_007432_020 Hb_000031_260 Hb_000031_260 Hb_000692_010--Hb_000031_260 Hb_004931_100 Hb_004931_100 Hb_000692_010--Hb_004931_100 Hb_000483_250 Hb_000483_250 Hb_000836_140--Hb_000483_250 Hb_008699_020 Hb_008699_020 Hb_000836_140--Hb_008699_020 Hb_060618_010 Hb_060618_010 Hb_000836_140--Hb_060618_010 Hb_000096_130 Hb_000096_130 Hb_000836_140--Hb_000096_130 Hb_002603_060 Hb_002603_060 Hb_000836_140--Hb_002603_060 Hb_000836_140--Hb_000506_120 Hb_001054_100 Hb_001054_100 Hb_004128_110--Hb_001054_100 Hb_002217_230 Hb_002217_230 Hb_004128_110--Hb_002217_230 Hb_004128_110--Hb_004931_100 Hb_000318_100 Hb_000318_100 Hb_004128_110--Hb_000318_100 Hb_000590_100 Hb_000590_100 Hb_004128_110--Hb_000590_100 Hb_002849_200 Hb_002849_200 Hb_004128_110--Hb_002849_200 Hb_020400_050 Hb_020400_050 Hb_000506_120--Hb_020400_050 Hb_002851_020 Hb_002851_020 Hb_000506_120--Hb_002851_020 Hb_000987_120 Hb_000987_120 Hb_000506_120--Hb_000987_120 Hb_000506_120--Hb_000318_100 Hb_000506_120--Hb_008699_020 Hb_000030_290 Hb_000030_290 Hb_000506_120--Hb_000030_290 Hb_007432_020--Hb_004931_100 Hb_007432_020--Hb_004128_110 Hb_000317_400 Hb_000317_400 Hb_007432_020--Hb_000317_400 Hb_105602_010 Hb_105602_010 Hb_007432_020--Hb_105602_010 Hb_007432_020--Hb_002217_230 Hb_000286_060 Hb_000286_060 Hb_000031_260--Hb_000286_060 Hb_000345_250 Hb_000345_250 Hb_000031_260--Hb_000345_250 Hb_000227_070 Hb_000227_070 Hb_000031_260--Hb_000227_070 Hb_001369_250 Hb_001369_250 Hb_000031_260--Hb_001369_250 Hb_010174_150 Hb_010174_150 Hb_000031_260--Hb_010174_150 Hb_003038_140 Hb_003038_140 Hb_000031_260--Hb_003038_140 Hb_005656_100 Hb_005656_100 Hb_004931_100--Hb_005656_100 Hb_002374_400 Hb_002374_400 Hb_004931_100--Hb_002374_400 Hb_001005_080 Hb_001005_080 Hb_004931_100--Hb_001005_080 Hb_004931_100--Hb_002217_230 Hb_000707_020 Hb_000707_020 Hb_004931_100--Hb_000707_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.679672 1.18781 0.629988 2.68536 1.56978 0.503946
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.39488 6.34199 1.33646 4.86623 1.14032

CAGE analysis