Hb_000692_170

Information

Type -
Description -
Location Contig692: 155165-155434
Sequence    

Annotation

kegg
ID rcu:RCOM_0811430
description hypothetical protein
nr
ID XP_012077742.1
description PREDICTED: uncharacterized protein LOC105638529 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAW3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13092 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54455: 154923-157070
cDNA
(Sanger)
(ID:Location)		 053_B08r.ab1: 156360-157070

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000692_170 0.0 - - PREDICTED: uncharacterized protein LOC105638529 [Jatropha curcas]
2 Hb_000025_750 0.0869493094 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
3 Hb_060437_010 0.096643874 - - E3 ubiquitin protein ligase RIE1 [Morus notabilis]
4 Hb_005725_070 0.1015485924 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001227_110 0.1035259825 - - U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
6 Hb_000093_130 0.1045765304 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
7 Hb_002728_020 0.1120133631 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105649143 isoform X1 [Jatropha curcas]
8 Hb_003813_200 0.1120168579 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_000849_150 0.1161284235 - - hypothetical protein JCGZ_15099 [Jatropha curcas]
10 Hb_004032_460 0.1183825724 - - -
11 Hb_001348_140 0.1207994733 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007416_200 0.1208707758 - - PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Jatropha curcas]
13 Hb_000640_210 0.121630381 - - hypothetical protein JCGZ_14045 [Jatropha curcas]
14 Hb_000392_280 0.1220081598 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
15 Hb_005333_020 0.123821185 - - PREDICTED: protein CutA, chloroplastic [Jatropha curcas]
16 Hb_002025_140 0.1246631339 - - PREDICTED: UBX domain-containing protein 2 isoform X1 [Jatropha curcas]
17 Hb_001009_050 0.1247627007 - - PREDICTED: WD repeat-containing protein 74 isoform X2 [Jatropha curcas]
18 Hb_003050_090 0.1251772421 - - lupus la ribonucleoprotein, putative [Ricinus communis]
19 Hb_000613_020 0.1256496502 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]
20 Hb_000173_370 0.1257027536 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000692_170 Hb_000692_170 Hb_000025_750 Hb_000025_750 Hb_000692_170--Hb_000025_750 Hb_060437_010 Hb_060437_010 Hb_000692_170--Hb_060437_010 Hb_005725_070 Hb_005725_070 Hb_000692_170--Hb_005725_070 Hb_001227_110 Hb_001227_110 Hb_000692_170--Hb_001227_110 Hb_000093_130 Hb_000093_130 Hb_000692_170--Hb_000093_130 Hb_002728_020 Hb_002728_020 Hb_000692_170--Hb_002728_020 Hb_000025_750--Hb_001227_110 Hb_000849_150 Hb_000849_150 Hb_000025_750--Hb_000849_150 Hb_001408_090 Hb_001408_090 Hb_000025_750--Hb_001408_090 Hb_000025_750--Hb_000093_130 Hb_002025_140 Hb_002025_140 Hb_000025_750--Hb_002025_140 Hb_001034_020 Hb_001034_020 Hb_060437_010--Hb_001034_020 Hb_003050_090 Hb_003050_090 Hb_060437_010--Hb_003050_090 Hb_012760_200 Hb_012760_200 Hb_060437_010--Hb_012760_200 Hb_001178_060 Hb_001178_060 Hb_060437_010--Hb_001178_060 Hb_060437_010--Hb_000025_750 Hb_000640_210 Hb_000640_210 Hb_060437_010--Hb_000640_210 Hb_012977_010 Hb_012977_010 Hb_005725_070--Hb_012977_010 Hb_001498_030 Hb_001498_030 Hb_005725_070--Hb_001498_030 Hb_005725_070--Hb_002025_140 Hb_002818_040 Hb_002818_040 Hb_005725_070--Hb_002818_040 Hb_005314_010 Hb_005314_010 Hb_005725_070--Hb_005314_010 Hb_024399_010 Hb_024399_010 Hb_005725_070--Hb_024399_010 Hb_000016_280 Hb_000016_280 Hb_001227_110--Hb_000016_280 Hb_001227_110--Hb_000093_130 Hb_001227_110--Hb_001408_090 Hb_001227_110--Hb_000640_210 Hb_025048_040 Hb_025048_040 Hb_001227_110--Hb_025048_040 Hb_000116_570 Hb_000116_570 Hb_000093_130--Hb_000116_570 Hb_001473_190 Hb_001473_190 Hb_000093_130--Hb_001473_190 Hb_007416_200 Hb_007416_200 Hb_000093_130--Hb_007416_200 Hb_074683_020 Hb_074683_020 Hb_000093_130--Hb_074683_020 Hb_000173_370 Hb_000173_370 Hb_002728_020--Hb_000173_370 Hb_001348_140 Hb_001348_140 Hb_002728_020--Hb_001348_140 Hb_089140_080 Hb_089140_080 Hb_002728_020--Hb_089140_080 Hb_000188_190 Hb_000188_190 Hb_002728_020--Hb_000188_190 Hb_002728_020--Hb_002025_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
53.8225 13.9201 4.81776 4.10633 43.2463 23.698
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.8928 9.02839 6.83043 7.15236 1.133

CAGE analysis