Hb_000692_180

Information

Type -
Description -
Location Contig692: 160616-161371
Sequence    

Annotation

kegg
ID rcu:RCOM_1599530
description hypothetical protein
nr
ID XP_012073722.1
description PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
swissprot
ID Q9SGS5
description Uncharacterized protein At1g76070 OS=Arabidopsis thaliana GN=At1g76070 PE=1 SV=1
trembl
ID A0A067KL66
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08163 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54456: 160731-161036
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000692_180 0.0 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]
2 Hb_001663_100 0.0579498216 - - -
3 Hb_001424_080 0.0991250311 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
4 Hb_034342_010 0.102627821 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000720_110 0.1128055341 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
6 Hb_000462_020 0.1251623642 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_022998_010 0.127101715 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_001621_020 0.1347256598 - - -
9 Hb_126077_020 0.1438739725 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
10 Hb_002400_250 0.1512440639 - - amino acid binding protein, putative [Ricinus communis]
11 Hb_001481_030 0.1513928629 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_005306_040 0.1516396416 - - calmodulin binding protein, putative [Ricinus communis]
13 Hb_007432_050 0.1532840633 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108 [Jatropha curcas]
14 Hb_003050_050 0.1557782736 - - hypothetical protein JCGZ_04619 [Jatropha curcas]
15 Hb_008215_010 0.1559004037 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003556_060 0.1657785001 - - -
17 Hb_162286_030 0.1675722681 - - PREDICTED: uncharacterized protein LOC105650163 [Jatropha curcas]
18 Hb_001723_070 0.1703384571 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
19 Hb_004452_080 0.1708370021 - - ring finger protein, putative [Ricinus communis]
20 Hb_000046_590 0.1726743225 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000692_180 Hb_000692_180 Hb_001663_100 Hb_001663_100 Hb_000692_180--Hb_001663_100 Hb_001424_080 Hb_001424_080 Hb_000692_180--Hb_001424_080 Hb_034342_010 Hb_034342_010 Hb_000692_180--Hb_034342_010 Hb_000720_110 Hb_000720_110 Hb_000692_180--Hb_000720_110 Hb_000462_020 Hb_000462_020 Hb_000692_180--Hb_000462_020 Hb_022998_010 Hb_022998_010 Hb_000692_180--Hb_022998_010 Hb_001663_100--Hb_001424_080 Hb_001663_100--Hb_034342_010 Hb_001663_100--Hb_022998_010 Hb_126077_020 Hb_126077_020 Hb_001663_100--Hb_126077_020 Hb_001663_100--Hb_000462_020 Hb_001424_080--Hb_034342_010 Hb_001424_080--Hb_126077_020 Hb_003556_060 Hb_003556_060 Hb_001424_080--Hb_003556_060 Hb_002400_250 Hb_002400_250 Hb_001424_080--Hb_002400_250 Hb_034342_010--Hb_126077_020 Hb_034342_010--Hb_003556_060 Hb_034342_010--Hb_022998_010 Hb_001481_030 Hb_001481_030 Hb_000720_110--Hb_001481_030 Hb_005306_040 Hb_005306_040 Hb_000720_110--Hb_005306_040 Hb_165404_010 Hb_165404_010 Hb_000720_110--Hb_165404_010 Hb_055147_010 Hb_055147_010 Hb_000720_110--Hb_055147_010 Hb_000075_110 Hb_000075_110 Hb_000720_110--Hb_000075_110 Hb_000462_020--Hb_002400_250 Hb_002374_110 Hb_002374_110 Hb_000462_020--Hb_002374_110 Hb_004931_060 Hb_004931_060 Hb_000462_020--Hb_004931_060 Hb_001596_040 Hb_001596_040 Hb_000462_020--Hb_001596_040 Hb_022998_010--Hb_126077_020 Hb_007432_050 Hb_007432_050 Hb_022998_010--Hb_007432_050 Hb_000649_030 Hb_000649_030 Hb_022998_010--Hb_000649_030 Hb_022998_010--Hb_003556_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.86129 0.389928 0.231887 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.09111 0

CAGE analysis